Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 AC006277.1-201ENST00000624348 1610 ntBASIC17.69■□□□□ 0.42
LRRC38Q5VT99 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 TOP3BP1-201ENST00000420768 1380 ntBASIC17.68■□□□□ 0.42
LRRC38Q5VT99 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 SART3-203ENST00000546611 1184 ntBASIC17.68■□□□□ 0.42
LRRC38Q5VT99 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 UBALD1-205ENST00000590891 2641 ntBASIC17.68■□□□□ 0.42
LRRC38Q5VT99 REXO1L6P-202ENST00000619970 1078 ntBASIC17.68■□□□□ 0.42
LRRC38Q5VT99 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 AC004706.3-202ENST00000621574 984 ntBASIC17.68■□□□□ 0.42
LRRC38Q5VT99 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC38Q5VT99 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 AC091304.2-201ENST00000564639 760 ntBASIC17.67■□□□□ 0.42
LRRC38Q5VT99 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 AC008608.2-201ENST00000606089 416 ntBASIC17.67■□□□□ 0.42
LRRC38Q5VT99 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC38Q5VT99 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LRRC38Q5VT99 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms