Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
HLA-BQ31612 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-BQ31612 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-BQ31612 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-BQ31612 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-BQ31612 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-BQ31612 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-BQ31612 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-BQ31612 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-BQ31612 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-BQ31612 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-BQ31612 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.42■□□□□ 0.22
HLA-BQ31612 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-BQ31612 AC003101.2-201ENST00000612557 442 ntBASIC16.42■□□□□ 0.22
HLA-BQ31612 AL662799.1-202ENST00000614205 422 ntBASIC16.42■□□□□ 0.22
HLA-BQ31612 AC025048.6-201ENST00000634326 1161 ntBASIC16.42■□□□□ 0.22
HLA-BQ31612 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-BQ31612 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-BQ31612 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-BQ31612 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HLA-BQ31612 AC133963.1-201ENST00000504166 1679 ntBASIC16.42■□□□□ 0.22
HLA-BQ31612 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-BQ31612 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-BQ31612 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-BQ31612 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-BQ31612 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-BQ31612 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-BQ31612 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
HLA-BQ31612 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-BQ31612 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-BQ31612 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HLA-BQ31612 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-BQ31612 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HLA-BQ31612 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HLA-BQ31612 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-BQ31612 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-BQ31612 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-BQ31612 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-BQ31612 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-BQ31612 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-BQ31612 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-BQ31612 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-BQ31612 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-BQ31612 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-BQ31612 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-BQ31612 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-BQ31612 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-BQ31612 CR383656.12-201ENST00000549567 513 ntBASIC16.41■□□□□ 0.22
HLA-BQ31612 RARRES2P9-201ENST00000565168 469 ntBASIC16.41■□□□□ 0.22
HLA-BQ31612 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.41■□□□□ 0.22
HLA-BQ31612 MPDU1-223ENST00000582151 728 ntBASIC16.41■□□□□ 0.22
HLA-BQ31612 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HLA-BQ31612 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
HLA-BQ31612 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-BQ31612 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-BQ31612 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-BQ31612 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-BQ31612 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-BQ31612 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-BQ31612 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-BQ31612 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-BQ31612 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-BQ31612 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-BQ31612 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-BQ31612 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.41■□□□□ 0.22
HLA-BQ31612 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-BQ31612 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.4■□□□□ 0.22
HLA-BQ31612 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-BQ31612 TSSK5P-201ENST00000423978 907 ntBASIC16.4■□□□□ 0.22
HLA-BQ31612 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-BQ31612 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-BQ31612 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-BQ31612 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-BQ31612 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-BQ31612 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-BQ31612 SPDYE22P-201ENST00000582158 798 ntBASIC16.4■□□□□ 0.22
HLA-BQ31612 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-BQ31612 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-BQ31612 AC004233.3-201ENST00000607794 1269 ntBASIC16.4■□□□□ 0.22
HLA-BQ31612 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HLA-BQ31612 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-BQ31612 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-BQ31612 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
HLA-BQ31612 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-BQ31612 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HLA-BQ31612 BICD1-207ENST00000551848 1962 ntBASIC16.4■□□□□ 0.22
HLA-BQ31612 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms