Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 AC104076.2-201ENST00000448912 469 ntBASIC15.15■□□□□ 0.02
ODF4Q2M2E3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 AC111152.3-201ENST00000569699 673 ntBASIC15.15■□□□□ 0.02
ODF4Q2M2E3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 AL592071.1-201ENST00000611956 408 ntBASIC15.15■□□□□ 0.02
ODF4Q2M2E3 IGHV3-41-201ENST00000613121 348 ntBASIC15.15■□□□□ 0.02
ODF4Q2M2E3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.15■□□□□ 0.02
ODF4Q2M2E3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ODF4Q2M2E3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 AL671277.2-201ENST00000458060 996 ntBASIC15.14■□□□□ 0.01
ODF4Q2M2E3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 AC125634.1-201ENST00000438758 1403 ntBASIC15.14■□□□□ 0.01
ODF4Q2M2E3 KRT8P10-201ENST00000450021 1447 ntBASIC15.14■□□□□ 0.01
ODF4Q2M2E3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF4Q2M2E3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms