Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDH17Q12864 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.23■□□□□ 0.35
CDH17Q12864 SCARNA2-201ENST00000458748 420 ntBASIC17.23■□□□□ 0.35
CDH17Q12864 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.23■□□□□ 0.35
CDH17Q12864 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
CDH17Q12864 SART3-203ENST00000546611 1184 ntBASIC17.23■□□□□ 0.35
CDH17Q12864 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.23■□□□□ 0.35
CDH17Q12864 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.23■□□□□ 0.35
CDH17Q12864 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDH17Q12864 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDH17Q12864 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH17Q12864 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH17Q12864 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.22■□□□□ 0.35
CDH17Q12864 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH17Q12864 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.22■□□□□ 0.35
CDH17Q12864 SAPCD2P3-201ENST00000455031 850 ntBASIC17.22■□□□□ 0.35
CDH17Q12864 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.22■□□□□ 0.35
CDH17Q12864 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CDH17Q12864 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH17Q12864 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
CDH17Q12864 AC139887.3-201ENST00000568585 713 ntBASIC17.22■□□□□ 0.35
CDH17Q12864 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.22■□□□□ 0.35
CDH17Q12864 MTDHP4-201ENST00000600287 670 ntBASIC17.22■□□□□ 0.35
CDH17Q12864 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.22■□□□□ 0.35
CDH17Q12864 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH17Q12864 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.22■□□□□ 0.35
CDH17Q12864 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CDH17Q12864 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CDH17Q12864 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CDH17Q12864 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH17Q12864 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 CROCCP1-201ENST00000426910 5675 ntBASIC17.21■□□□□ 0.35
CDH17Q12864 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH17Q12864 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH17Q12864 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH17Q12864 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDH17Q12864 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH17Q12864 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDH17Q12864 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH17Q12864 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDH17Q12864 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDH17Q12864 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.21■□□□□ 0.35
CDH17Q12864 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH17Q12864 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CDH17Q12864 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.21■□□□□ 0.35
CDH17Q12864 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.21■□□□□ 0.35
CDH17Q12864 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.21■□□□□ 0.35
CDH17Q12864 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH17Q12864 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH17Q12864 TERC-201ENST00000602385 541 ntBASIC17.21■□□□□ 0.35
CDH17Q12864 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDH17Q12864 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH17Q12864 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDH17Q12864 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH17Q12864 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH17Q12864 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH17Q12864 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms