Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
UBXN1Q04323 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
UBXN1Q04323 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
UBXN1Q04323 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.71■□□□□ 0.59
UBXN1Q04323 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
UBXN1Q04323 AC008741.2-201ENST00000612792 3115 ntBASIC18.71■□□□□ 0.59
UBXN1Q04323 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.71■□□□□ 0.59
UBXN1Q04323 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.71■□□□□ 0.59
UBXN1Q04323 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.71■□□□□ 0.59
UBXN1Q04323 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.71■□□□□ 0.59
UBXN1Q04323 MINOS1P3-201ENST00000457048 203 ntBASIC18.71■□□□□ 0.59
UBXN1Q04323 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
UBXN1Q04323 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.71■□□□□ 0.59
UBXN1Q04323 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.71■□□□□ 0.59
UBXN1Q04323 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.71■□□□□ 0.59
UBXN1Q04323 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
UBXN1Q04323 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.71■□□□□ 0.59
UBXN1Q04323 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBXN1Q04323 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
UBXN1Q04323 INTS4P1-201ENST00000438455 1935 ntBASIC18.7■□□□□ 0.58
UBXN1Q04323 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBXN1Q04323 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBXN1Q04323 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBXN1Q04323 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBXN1Q04323 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.7■□□□□ 0.58
UBXN1Q04323 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBXN1Q04323 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.7■□□□□ 0.58
UBXN1Q04323 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBXN1Q04323 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBXN1Q04323 HLA-A-202ENST00000376806 1854 ntBASIC18.7■□□□□ 0.58
UBXN1Q04323 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBXN1Q04323 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
UBXN1Q04323 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.7■□□□□ 0.58
UBXN1Q04323 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.7■□□□□ 0.58
UBXN1Q04323 PMPCAP1-201ENST00000508114 1576 ntBASIC18.7■□□□□ 0.58
UBXN1Q04323 FAM86EP-206ENST00000510506 987 ntBASIC18.7■□□□□ 0.58
UBXN1Q04323 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.7■□□□□ 0.58
UBXN1Q04323 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.7■□□□□ 0.58
UBXN1Q04323 Z69720.1-201ENST00000601483 472 ntBASIC18.7■□□□□ 0.58
UBXN1Q04323 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.7■□□□□ 0.58
UBXN1Q04323 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.7■□□□□ 0.58
UBXN1Q04323 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBXN1Q04323 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UBXN1Q04323 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
UBXN1Q04323 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
UBXN1Q04323 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.7■□□□□ 0.58
UBXN1Q04323 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBXN1Q04323 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.7■□□□□ 0.58
UBXN1Q04323 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBXN1Q04323 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.7■□□□□ 0.58
UBXN1Q04323 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.7■□□□□ 0.58
UBXN1Q04323 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBXN1Q04323 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBXN1Q04323 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
UBXN1Q04323 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.69■□□□□ 0.58
UBXN1Q04323 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
UBXN1Q04323 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
UBXN1Q04323 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.69■□□□□ 0.58
UBXN1Q04323 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.69■□□□□ 0.58
UBXN1Q04323 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.69■□□□□ 0.58
UBXN1Q04323 LINC02199-201ENST00000506655 2702 ntBASIC18.69■□□□□ 0.58
UBXN1Q04323 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
UBXN1Q04323 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
UBXN1Q04323 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.69■□□□□ 0.58
UBXN1Q04323 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.69■□□□□ 0.58
UBXN1Q04323 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBXN1Q04323 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBXN1Q04323 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBXN1Q04323 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.69■□□□□ 0.58
UBXN1Q04323 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBXN1Q04323 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.69■□□□□ 0.58
UBXN1Q04323 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBXN1Q04323 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBXN1Q04323 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
UBXN1Q04323 TSSC2-201ENST00000450217 709 ntBASIC18.69■□□□□ 0.58
UBXN1Q04323 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.69■□□□□ 0.58
UBXN1Q04323 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBXN1Q04323 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.69■□□□□ 0.58
UBXN1Q04323 AC096582.2-201ENST00000510860 516 ntBASIC18.69■□□□□ 0.58
UBXN1Q04323 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.69■□□□□ 0.58
UBXN1Q04323 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.69■□□□□ 0.58
UBXN1Q04323 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.69■□□□□ 0.58
UBXN1Q04323 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms