Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.24■□□□□ 0.35
PRAMEP78395 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PRAMEP78395 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEP78395 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PRAMEP78395 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
PRAMEP78395 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEP78395 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PRAMEP78395 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEP78395 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.23■□□□□ 0.35
PRAMEP78395 RBM17P3-201ENST00000417687 1192 ntBASIC17.23■□□□□ 0.35
PRAMEP78395 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEP78395 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEP78395 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEP78395 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.23■□□□□ 0.35
PRAMEP78395 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEP78395 AC091304.2-201ENST00000564639 760 ntBASIC17.23■□□□□ 0.35
PRAMEP78395 LINC01711-201ENST00000598340 967 ntBASIC17.23■□□□□ 0.35
PRAMEP78395 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEP78395 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEP78395 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEP78395 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PRAMEP78395 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.22■□□□□ 0.35
PRAMEP78395 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEP78395 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PRAMEP78395 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.22■□□□□ 0.35
PRAMEP78395 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.22■□□□□ 0.35
PRAMEP78395 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.22■□□□□ 0.35
PRAMEP78395 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEP78395 AC004817.3-201ENST00000602957 2129 ntBASIC17.22■□□□□ 0.35
PRAMEP78395 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.22■□□□□ 0.35
PRAMEP78395 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PRAMEP78395 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PRAMEP78395 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEP78395 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.22■□□□□ 0.35
PRAMEP78395 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEP78395 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PRAMEP78395 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEP78395 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEP78395 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PRAMEP78395 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEP78395 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 AC092068.3-201ENST00000587894 2016 ntBASIC17.21■□□□□ 0.35
PRAMEP78395 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PRAMEP78395 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEP78395 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms