Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AC011495.1-201ENST00000498085 584 ntBASIC20.08■□□□□ 0.8
CNTNAP1P78357 AC119751.2-201ENST00000504529 210 ntBASIC20.08■□□□□ 0.8
CNTNAP1P78357 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP1P78357 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP1P78357 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.08■□□□□ 0.8
CNTNAP1P78357 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CNTNAP1P78357 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
CNTNAP1P78357 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.08■□□□□ 0.8
CNTNAP1P78357 AL138828.2-201ENST00000615812 383 ntBASIC20.08■□□□□ 0.8
CNTNAP1P78357 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 EGFEM1P-202ENST00000431685 1563 ntBASIC20.07■□□□□ 0.8
CNTNAP1P78357 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.07■□□□□ 0.8
CNTNAP1P78357 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 AP000842.3-202ENST00000569238 1080 ntBASIC20.07■□□□□ 0.8
CNTNAP1P78357 AL031055.1-201ENST00000606362 631 ntBASIC20.07■□□□□ 0.8
CNTNAP1P78357 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP1P78357 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CNTNAP1P78357 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.06■□□□□ 0.8
CNTNAP1P78357 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CNTNAP1P78357 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.06■□□□□ 0.8
CNTNAP1P78357 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.06■□□□□ 0.8
CNTNAP1P78357 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.06■□□□□ 0.8
CNTNAP1P78357 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CNTNAP1P78357 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CNTNAP1P78357 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CNTNAP1P78357 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CNTNAP1P78357 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.06■□□□□ 0.8
CNTNAP1P78357 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.06■□□□□ 0.8
CNTNAP1P78357 AC008738.7-201ENST00000609744 511 ntBASIC20.06■□□□□ 0.8
CNTNAP1P78357 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP1P78357 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CNTNAP1P78357 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP1P78357 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP1P78357 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP1P78357 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP1P78357 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP1P78357 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP1P78357 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP1P78357 KRT8P44-201ENST00000441609 1350 ntBASIC20.05■□□□□ 0.8
CNTNAP1P78357 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP1P78357 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP1P78357 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP1P78357 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 MIR4538-201ENST00000581377 78 ntBASIC20.05■□□□□ 0.8
CNTNAP1P78357 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP1P78357 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP1P78357 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms