Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.8□□□□□ -0.04
UBA52P62987 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.8□□□□□ -0.04
UBA52P62987 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.8□□□□□ -0.04
UBA52P62987 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
UBA52P62987 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.8□□□□□ -0.04
UBA52P62987 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.8□□□□□ -0.04
UBA52P62987 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.8□□□□□ -0.04
UBA52P62987 SLC25A6P4-201ENST00000586535 553 ntBASIC14.8□□□□□ -0.04
UBA52P62987 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.8□□□□□ -0.04
UBA52P62987 GPR32P1-201ENST00000601788 811 ntBASIC14.8□□□□□ -0.04
UBA52P62987 AL121912.1-201ENST00000603683 238 ntBASIC14.8□□□□□ -0.04
UBA52P62987 AL353801.3-201ENST00000609898 542 ntBASIC14.8□□□□□ -0.04
UBA52P62987 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.8□□□□□ -0.04
UBA52P62987 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.8□□□□□ -0.04
UBA52P62987 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.8□□□□□ -0.04
UBA52P62987 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 AC233702.3-201ENST00000578656 1387 ntBASIC14.8□□□□□ -0.04
UBA52P62987 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UBA52P62987 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.8□□□□□ -0.04
UBA52P62987 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UBA52P62987 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
UBA52P62987 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 AC007950.2-201ENST00000615045 2347 ntBASIC14.8□□□□□ -0.04
UBA52P62987 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.8□□□□□ -0.04
UBA52P62987 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
UBA52P62987 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
UBA52P62987 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
UBA52P62987 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.79□□□□□ -0.04
UBA52P62987 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
UBA52P62987 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.79□□□□□ -0.04
UBA52P62987 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.79□□□□□ -0.04
UBA52P62987 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.79□□□□□ -0.04
UBA52P62987 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 MIR564-202ENST00000385049 94 ntBASIC14.79□□□□□ -0.04
UBA52P62987 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UBA52P62987 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.79□□□□□ -0.04
UBA52P62987 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.79□□□□□ -0.04
UBA52P62987 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.79□□□□□ -0.04
UBA52P62987 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UBA52P62987 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.79□□□□□ -0.04
UBA52P62987 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.79□□□□□ -0.04
UBA52P62987 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
UBA52P62987 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBA52P62987 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.78□□□□□ -0.04
UBA52P62987 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBA52P62987 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
UBA52P62987 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBA52P62987 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UBA52P62987 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UBA52P62987 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UBA52P62987 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBA52P62987 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
UBA52P62987 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBA52P62987 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
UBA52P62987 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.78□□□□□ -0.04
UBA52P62987 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.78□□□□□ -0.04
UBA52P62987 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBA52P62987 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBA52P62987 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBA52P62987 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms