Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 AC111152.3-201ENST00000569699 673 ntBASIC13.72□□□□□ -0.21
PAX9P55771 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.72□□□□□ -0.21
PAX9P55771 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.72□□□□□ -0.21
PAX9P55771 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PAX9P55771 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX9P55771 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PAX9P55771 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PAX9P55771 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.72□□□□□ -0.21
PAX9P55771 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PAX9P55771 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PAX9P55771 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PAX9P55771 AL356309.3-201ENST00000624132 1934 ntBASIC13.72□□□□□ -0.21
PAX9P55771 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX9P55771 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
PAX9P55771 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX9P55771 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX9P55771 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.72□□□□□ -0.21
PAX9P55771 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PAX9P55771 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PAX9P55771 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.71□□□□□ -0.21
PAX9P55771 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.71□□□□□ -0.21
PAX9P55771 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
PAX9P55771 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
PAX9P55771 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.71□□□□□ -0.21
PAX9P55771 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 SPDYE15P-201ENST00000424157 909 ntBASIC13.71□□□□□ -0.21
PAX9P55771 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.71□□□□□ -0.21
PAX9P55771 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.71□□□□□ -0.21
PAX9P55771 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.71□□□□□ -0.21
PAX9P55771 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.71□□□□□ -0.21
PAX9P55771 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.71□□□□□ -0.21
PAX9P55771 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.71□□□□□ -0.21
PAX9P55771 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.71□□□□□ -0.21
PAX9P55771 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.71□□□□□ -0.21
PAX9P55771 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PAX9P55771 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PAX9P55771 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.71□□□□□ -0.21
PAX9P55771 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PAX9P55771 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PAX9P55771 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PAX9P55771 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PAX9P55771 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.71□□□□□ -0.22
PAX9P55771 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PAX9P55771 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
PAX9P55771 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PAX9P55771 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.71□□□□□ -0.22
PAX9P55771 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PAX9P55771 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.7□□□□□ -0.22
PAX9P55771 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.7□□□□□ -0.22
PAX9P55771 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.7□□□□□ -0.22
PAX9P55771 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PAX9P55771 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PAX9P55771 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.7□□□□□ -0.22
PAX9P55771 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PAX9P55771 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.7□□□□□ -0.22
PAX9P55771 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PAX9P55771 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.7□□□□□ -0.22
PAX9P55771 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.7□□□□□ -0.22
PAX9P55771 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.7□□□□□ -0.22
PAX9P55771 AC103564.2-201ENST00000432853 1299 ntBASIC13.7□□□□□ -0.22
PAX9P55771 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PAX9P55771 AC092597.1-201ENST00000487352 616 ntBASIC13.7□□□□□ -0.22
PAX9P55771 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.7□□□□□ -0.22
PAX9P55771 ZNF444P1-201ENST00000559497 298 ntBASIC13.7□□□□□ -0.22
PAX9P55771 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms