Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CDH12P55289 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH12P55289 AL049757.1-201ENST00000616842 1596 ntBASIC15.94■□□□□ 0.14
CDH12P55289 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH12P55289 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH12P55289 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CDH12P55289 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CDH12P55289 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH12P55289 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH12P55289 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH12P55289 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.94■□□□□ 0.14
CDH12P55289 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CDH12P55289 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH12P55289 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CDH12P55289 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH12P55289 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH12P55289 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH12P55289 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CDH12P55289 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH12P55289 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 FAM220CP-201ENST00000395253 831 ntBASIC15.93■□□□□ 0.14
CDH12P55289 AC103564.2-201ENST00000432853 1299 ntBASIC15.93■□□□□ 0.14
CDH12P55289 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH12P55289 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.93■□□□□ 0.14
CDH12P55289 AC091607.1-201ENST00000490318 1060 ntBASIC15.93■□□□□ 0.14
CDH12P55289 FAM86EP-206ENST00000510506 987 ntBASIC15.93■□□□□ 0.14
CDH12P55289 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.93■□□□□ 0.14
CDH12P55289 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH12P55289 AL121672.3-201ENST00000608644 468 ntBASIC15.93■□□□□ 0.14
CDH12P55289 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH12P55289 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH12P55289 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CDH12P55289 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH12P55289 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CDH12P55289 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH12P55289 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDH12P55289 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CDH12P55289 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDH12P55289 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
CDH12P55289 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
CDH12P55289 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH12P55289 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CDH12P55289 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CDH12P55289 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH12P55289 AC016734.2-201ENST00000624325 1377 ntBASIC15.92■□□□□ 0.14
CDH12P55289 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
CDH12P55289 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH12P55289 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH12P55289 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CDH12P55289 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.92■□□□□ 0.14
CDH12P55289 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH12P55289 CHCHD2P8-201ENST00000429873 447 ntBASIC15.92■□□□□ 0.14
CDH12P55289 AC246785.2-201ENST00000432512 513 ntBASIC15.92■□□□□ 0.14
CDH12P55289 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.92■□□□□ 0.14
CDH12P55289 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.92■□□□□ 0.14
CDH12P55289 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.92■□□□□ 0.14
CDH12P55289 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.92■□□□□ 0.14
CDH12P55289 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
CDH12P55289 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH12P55289 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms