Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LIMK2P53671 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.22■□□□□ 0.35
LIMK2P53671 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LIMK2P53671 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIMK2P53671 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.22■□□□□ 0.35
LIMK2P53671 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
LIMK2P53671 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.22■□□□□ 0.35
LIMK2P53671 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.22■□□□□ 0.35
LIMK2P53671 ABCD1P5-201ENST00000445663 754 ntBASIC17.22■□□□□ 0.35
LIMK2P53671 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.22■□□□□ 0.35
LIMK2P53671 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LIMK2P53671 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LIMK2P53671 AL671883.3-201ENST00000603274 991 ntBASIC17.22■□□□□ 0.35
LIMK2P53671 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.22■□□□□ 0.35
LIMK2P53671 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.22■□□□□ 0.35
LIMK2P53671 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.22■□□□□ 0.35
LIMK2P53671 AF228730.7-201ENST00000641842 219 ntBASIC17.22■□□□□ 0.35
LIMK2P53671 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIMK2P53671 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LIMK2P53671 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LIMK2P53671 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIMK2P53671 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LIMK2P53671 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LIMK2P53671 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.22■□□□□ 0.35
LIMK2P53671 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIMK2P53671 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.22■□□□□ 0.35
LIMK2P53671 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.22■□□□□ 0.35
LIMK2P53671 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
LIMK2P53671 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.21■□□□□ 0.35
LIMK2P53671 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.21■□□□□ 0.35
LIMK2P53671 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LIMK2P53671 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.21■□□□□ 0.35
LIMK2P53671 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.21■□□□□ 0.35
LIMK2P53671 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LIMK2P53671 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LIMK2P53671 AD001527.2-201ENST00000622994 785 ntBASIC17.21■□□□□ 0.35
LIMK2P53671 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
LIMK2P53671 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.21■□□□□ 0.35
LIMK2P53671 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.21■□□□□ 0.35
LIMK2P53671 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIMK2P53671 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LIMK2P53671 FRMD8P1-201ENST00000440433 1524 ntBASIC17.21■□□□□ 0.34
LIMK2P53671 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LIMK2P53671 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.21■□□□□ 0.34
LIMK2P53671 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.21■□□□□ 0.34
LIMK2P53671 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.21■□□□□ 0.34
LIMK2P53671 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.2■□□□□ 0.34
LIMK2P53671 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LIMK2P53671 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.2■□□□□ 0.34
LIMK2P53671 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.2■□□□□ 0.34
LIMK2P53671 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.2■□□□□ 0.34
LIMK2P53671 KLF4P1-201ENST00000412782 1185 ntBASIC17.2■□□□□ 0.34
LIMK2P53671 PMS2P1-201ENST00000431037 1228 ntBASIC17.2■□□□□ 0.34
LIMK2P53671 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.2■□□□□ 0.34
LIMK2P53671 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.2■□□□□ 0.34
LIMK2P53671 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
LIMK2P53671 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.2■□□□□ 0.34
LIMK2P53671 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LIMK2P53671 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIMK2P53671 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LIMK2P53671 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIMK2P53671 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.19■□□□□ 0.34
LIMK2P53671 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.19■□□□□ 0.34
LIMK2P53671 AL603756.1-201ENST00000606511 2163 ntBASIC17.19■□□□□ 0.34
LIMK2P53671 GPR89P-201ENST00000407924 1495 ntBASIC17.19■□□□□ 0.34
LIMK2P53671 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
LIMK2P53671 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.19■□□□□ 0.34
LIMK2P53671 RPS2P28-201ENST00000314255 741 ntBASIC17.19■□□□□ 0.34
LIMK2P53671 MIR574-201ENST00000385209 96 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms