Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KNTC1P50748 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KNTC1P50748 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.12■□□□□ 0.17
KNTC1P50748 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KNTC1P50748 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KNTC1P50748 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.12■□□□□ 0.17
KNTC1P50748 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.12■□□□□ 0.17
KNTC1P50748 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KNTC1P50748 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.12■□□□□ 0.17
KNTC1P50748 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
KNTC1P50748 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KNTC1P50748 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KNTC1P50748 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KNTC1P50748 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 AL353779.1-201ENST00000434793 351 ntBASIC16.11■□□□□ 0.17
KNTC1P50748 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.11■□□□□ 0.17
KNTC1P50748 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 IGHV3-62-201ENST00000520057 340 ntBASIC16.11■□□□□ 0.17
KNTC1P50748 AC109635.5-201ENST00000533593 962 ntBASIC16.11■□□□□ 0.17
KNTC1P50748 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.11■□□□□ 0.17
KNTC1P50748 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.11■□□□□ 0.17
KNTC1P50748 MIR3909-201ENST00000579518 119 ntBASIC16.11■□□□□ 0.17
KNTC1P50748 AC027307.2-201ENST00000591252 911 ntBASIC16.11■□□□□ 0.17
KNTC1P50748 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.11■□□□□ 0.17
KNTC1P50748 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KNTC1P50748 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KNTC1P50748 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
KNTC1P50748 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KNTC1P50748 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.11■□□□□ 0.17
KNTC1P50748 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.11■□□□□ 0.17
KNTC1P50748 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.11■□□□□ 0.17
KNTC1P50748 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KNTC1P50748 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.11■□□□□ 0.17
KNTC1P50748 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.11■□□□□ 0.17
KNTC1P50748 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.11■□□□□ 0.17
KNTC1P50748 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.11■□□□□ 0.17
KNTC1P50748 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.11■□□□□ 0.17
KNTC1P50748 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.11■□□□□ 0.17
KNTC1P50748 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.11■□□□□ 0.17
KNTC1P50748 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.11■□□□□ 0.17
KNTC1P50748 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KNTC1P50748 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.11■□□□□ 0.17
KNTC1P50748 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KNTC1P50748 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.1■□□□□ 0.17
KNTC1P50748 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.1■□□□□ 0.17
KNTC1P50748 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.1■□□□□ 0.17
KNTC1P50748 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.1■□□□□ 0.17
KNTC1P50748 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KNTC1P50748 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
KNTC1P50748 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
KNTC1P50748 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KNTC1P50748 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KNTC1P50748 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.1■□□□□ 0.17
KNTC1P50748 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.1■□□□□ 0.17
KNTC1P50748 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.1■□□□□ 0.17
KNTC1P50748 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KNTC1P50748 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KNTC1P50748 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.1■□□□□ 0.17
KNTC1P50748 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 RNU1-129P-201ENST00000384064 167 ntBASIC16.1■□□□□ 0.17
KNTC1P50748 DGCR5-201ENST00000399539 862 ntBASIC16.1■□□□□ 0.17
KNTC1P50748 TREML5P-201ENST00000421694 576 ntBASIC16.1■□□□□ 0.17
KNTC1P50748 U1.21-201ENST00000580816 167 ntBASIC16.1■□□□□ 0.17
KNTC1P50748 AL158211.3-201ENST00000607385 239 ntBASIC16.1■□□□□ 0.17
KNTC1P50748 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.1■□□□□ 0.17
KNTC1P50748 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KNTC1P50748 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms