Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.2■□□□□ 0.02
SRP9P49458 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.2■□□□□ 0.02
SRP9P49458 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.19■□□□□ 0.02
SRP9P49458 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 AC116353.5-201ENST00000638148 1699 ntBASIC15.19■□□□□ 0.02
SRP9P49458 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SRP9P49458 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SRP9P49458 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.19■□□□□ 0.02
SRP9P49458 LINC00265-3P-201ENST00000447588 903 ntBASIC15.19■□□□□ 0.02
SRP9P49458 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.19■□□□□ 0.02
SRP9P49458 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.19■□□□□ 0.02
SRP9P49458 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.19■□□□□ 0.02
SRP9P49458 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 NPAP1P7-201ENST00000613027 823 ntBASIC15.19■□□□□ 0.02
SRP9P49458 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.19■□□□□ 0.02
SRP9P49458 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.19■□□□□ 0.02
SRP9P49458 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.19■□□□□ 0.02
SRP9P49458 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
SRP9P49458 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SRP9P49458 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.18■□□□□ 0.02
SRP9P49458 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
SRP9P49458 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.18■□□□□ 0.02
SRP9P49458 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SRP9P49458 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.18■□□□□ 0.02
SRP9P49458 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SRP9P49458 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 AC092068.3-201ENST00000587894 2016 ntBASIC15.18■□□□□ 0.02
SRP9P49458 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SRP9P49458 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 AP002383.4-201ENST00000442518 975 ntBASIC15.18■□□□□ 0.02
SRP9P49458 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.18■□□□□ 0.02
SRP9P49458 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.18■□□□□ 0.02
SRP9P49458 TOB2P1-201ENST00000469761 992 ntBASIC15.18■□□□□ 0.02
SRP9P49458 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.18■□□□□ 0.02
SRP9P49458 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
SRP9P49458 TPSP2-201ENST00000561760 610 ntBASIC15.18■□□□□ 0.02
SRP9P49458 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.18■□□□□ 0.02
SRP9P49458 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.18■□□□□ 0.02
SRP9P49458 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.18■□□□□ 0.02
SRP9P49458 AC092119.3-201ENST00000612618 583 ntBASIC15.18■□□□□ 0.02
SRP9P49458 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.18■□□□□ 0.02
SRP9P49458 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.18■□□□□ 0.02
SRP9P49458 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.18■□□□□ 0.02
SRP9P49458 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SRP9P49458 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRP9P49458 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SRP9P49458 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRP9P49458 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.17■□□□□ 0.02
SRP9P49458 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRP9P49458 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRP9P49458 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SRP9P49458 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRP9P49458 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRP9P49458 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRP9P49458 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SRP9P49458 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SRP9P49458 MST1L-201ENST00000442552 2185 ntBASIC15.17■□□□□ 0.02
SRP9P49458 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms