Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.98■□□□□ 0.63
CENPFP49454 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
CENPFP49454 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.98■□□□□ 0.63
CENPFP49454 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.98■□□□□ 0.63
CENPFP49454 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CENPFP49454 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CENPFP49454 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 TTTY23B-201ENST00000442790 549 ntBASIC18.98■□□□□ 0.63
CENPFP49454 BANF1P1-201ENST00000553684 263 ntBASIC18.98■□□□□ 0.63
CENPFP49454 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.98■□□□□ 0.63
CENPFP49454 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.98■□□□□ 0.63
CENPFP49454 HLA-V-204ENST00000476601 1289 ntBASIC18.98■□□□□ 0.63
CENPFP49454 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.98■□□□□ 0.63
CENPFP49454 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.98■□□□□ 0.63
CENPFP49454 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.98■□□□□ 0.63
CENPFP49454 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.98■□□□□ 0.63
CENPFP49454 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CENPFP49454 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.98■□□□□ 0.63
CENPFP49454 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CENPFP49454 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.97■□□□□ 0.63
CENPFP49454 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CENPFP49454 AL133338.1-201ENST00000565695 1517 ntBASIC18.97■□□□□ 0.63
CENPFP49454 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.97■□□□□ 0.63
CENPFP49454 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.97■□□□□ 0.63
CENPFP49454 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CENPFP49454 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.97■□□□□ 0.63
CENPFP49454 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.97■□□□□ 0.63
CENPFP49454 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.97■□□□□ 0.63
CENPFP49454 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.97■□□□□ 0.63
CENPFP49454 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.97■□□□□ 0.63
CENPFP49454 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.97■□□□□ 0.63
CENPFP49454 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.97■□□□□ 0.63
CENPFP49454 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.97■□□□□ 0.63
CENPFP49454 AL031055.1-201ENST00000606362 631 ntBASIC18.97■□□□□ 0.63
CENPFP49454 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CENPFP49454 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.97■□□□□ 0.63
CENPFP49454 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPFP49454 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.96■□□□□ 0.63
CENPFP49454 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.96■□□□□ 0.63
CENPFP49454 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.96■□□□□ 0.63
CENPFP49454 AL512343.1-201ENST00000605837 169 ntBASIC18.96■□□□□ 0.63
CENPFP49454 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.96■□□□□ 0.63
CENPFP49454 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CENPFP49454 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CENPFP49454 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.96■□□□□ 0.63
CENPFP49454 SPDYE19P-201ENST00000338590 713 ntBASIC18.96■□□□□ 0.63
CENPFP49454 ZNF767P-206ENST00000513792 565 ntBASIC18.96■□□□□ 0.63
CENPFP49454 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.96■□□□□ 0.63
CENPFP49454 AC003101.2-201ENST00000612557 442 ntBASIC18.96■□□□□ 0.63
CENPFP49454 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.96■□□□□ 0.63
CENPFP49454 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CENPFP49454 LYSMD4-203ENST00000378904 2122 ntBASIC18.96■□□□□ 0.63
CENPFP49454 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CENPFP49454 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CENPFP49454 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CENPFP49454 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CENPFP49454 RPL37AP1-201ENST00000412502 279 ntBASIC18.96■□□□□ 0.63
CENPFP49454 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
CENPFP49454 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
CENPFP49454 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CENPFP49454 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CENPFP49454 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.96■□□□□ 0.63
CENPFP49454 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.96■□□□□ 0.63
CENPFP49454 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CENPFP49454 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.96■□□□□ 0.63
CENPFP49454 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CENPFP49454 AC004408.2-201ENST00000623613 2777 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms