Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.02□□□□□ -0.17
NKX2-1P43699 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.02□□□□□ -0.17
NKX2-1P43699 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX2-1P43699 AC128688.1-201ENST00000487626 519 ntBASIC14.02□□□□□ -0.17
NKX2-1P43699 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-1P43699 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.02□□□□□ -0.17
NKX2-1P43699 AP002490.2-201ENST00000524791 560 ntBASIC14.02□□□□□ -0.17
NKX2-1P43699 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-1P43699 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX2-1P43699 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.02□□□□□ -0.17
NKX2-1P43699 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-1P43699 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-1P43699 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-1P43699 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX2-1P43699 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.02□□□□□ -0.17
NKX2-1P43699 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
NKX2-1P43699 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-1P43699 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX2-1P43699 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 HLA-A-202ENST00000376806 1854 ntBASIC14.01□□□□□ -0.17
NKX2-1P43699 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
NKX2-1P43699 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX2-1P43699 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NKX2-1P43699 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX2-1P43699 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.01□□□□□ -0.17
NKX2-1P43699 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NKX2-1P43699 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX2-1P43699 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
NKX2-1P43699 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 TSPY14P-201ENST00000303979 915 ntBASIC14.01□□□□□ -0.17
NKX2-1P43699 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
NKX2-1P43699 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.01□□□□□ -0.17
NKX2-1P43699 AL390955.1-201ENST00000428694 934 ntBASIC14.01□□□□□ -0.17
NKX2-1P43699 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX2-1P43699 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NKX2-1P43699 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX2-1P43699 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.01□□□□□ -0.17
NKX2-1P43699 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.01□□□□□ -0.17
NKX2-1P43699 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX2-1P43699 AP000525.1-201ENST00000608286 694 ntBASIC14.01□□□□□ -0.17
NKX2-1P43699 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NKX2-1P43699 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.01□□□□□ -0.17
NKX2-1P43699 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-1P43699 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NKX2-1P43699 AL513477.1-201ENST00000602865 2407 ntBASIC14.01□□□□□ -0.17
NKX2-1P43699 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.01□□□□□ -0.17
NKX2-1P43699 AC068418.2-201ENST00000577309 3703 ntBASIC14.01□□□□□ -0.17
NKX2-1P43699 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.01□□□□□ -0.17
NKX2-1P43699 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NKX2-1P43699 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
NKX2-1P43699 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NKX2-1P43699 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NKX2-1P43699 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NKX2-1P43699 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14□□□□□ -0.17
NKX2-1P43699 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 TBC1D3P5-201ENST00000579401 1545 ntBASIC14□□□□□ -0.17
NKX2-1P43699 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NKX2-1P43699 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
NKX2-1P43699 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
NKX2-1P43699 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14□□□□□ -0.17
NKX2-1P43699 COX5BP2-201ENST00000392354 334 ntBASIC14□□□□□ -0.17
NKX2-1P43699 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 TSPY7P-201ENST00000431358 1114 ntBASIC14□□□□□ -0.17
NKX2-1P43699 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14□□□□□ -0.17
NKX2-1P43699 EGLN1P1-201ENST00000531623 762 ntBASIC14□□□□□ -0.17
NKX2-1P43699 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14□□□□□ -0.17
NKX2-1P43699 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-1P43699 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14□□□□□ -0.17
NKX2-1P43699 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms