Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CEACAM3P40198 AC136632.2-201ENST00000512891 861 ntBASIC13.94□□□□□ -0.18
CEACAM3P40198 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CEACAM3P40198 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.94□□□□□ -0.18
CEACAM3P40198 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CEACAM3P40198 AC104692.2-201ENST00000603054 253 ntBASIC13.94□□□□□ -0.18
CEACAM3P40198 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.94□□□□□ -0.18
CEACAM3P40198 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.94□□□□□ -0.18
CEACAM3P40198 AC005593.1-201ENST00000624894 515 ntBASIC13.94□□□□□ -0.18
CEACAM3P40198 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.94□□□□□ -0.18
CEACAM3P40198 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CEACAM3P40198 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CEACAM3P40198 AC124067.4-201ENST00000519691 2379 ntBASIC13.94□□□□□ -0.18
CEACAM3P40198 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CEACAM3P40198 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CEACAM3P40198 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CEACAM3P40198 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CEACAM3P40198 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.94□□□□□ -0.18
CEACAM3P40198 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CEACAM3P40198 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.94□□□□□ -0.18
CEACAM3P40198 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.94□□□□□ -0.18
CEACAM3P40198 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CEACAM3P40198 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.93□□□□□ -0.18
CEACAM3P40198 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.93□□□□□ -0.18
CEACAM3P40198 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.93□□□□□ -0.18
CEACAM3P40198 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.93□□□□□ -0.18
CEACAM3P40198 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.93□□□□□ -0.18
CEACAM3P40198 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CEACAM3P40198 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CEACAM3P40198 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CEACAM3P40198 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CEACAM3P40198 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.93□□□□□ -0.18
CEACAM3P40198 AL031284.1-201ENST00000419297 478 ntBASIC13.93□□□□□ -0.18
CEACAM3P40198 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
CEACAM3P40198 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.93□□□□□ -0.18
CEACAM3P40198 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.93□□□□□ -0.18
CEACAM3P40198 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CEACAM3P40198 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
CEACAM3P40198 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.93□□□□□ -0.18
CEACAM3P40198 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.93□□□□□ -0.18
CEACAM3P40198 GGTLC5P-201ENST00000617623 998 ntBASIC13.93□□□□□ -0.18
CEACAM3P40198 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CEACAM3P40198 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.93□□□□□ -0.18
CEACAM3P40198 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.93□□□□□ -0.18
CEACAM3P40198 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CEACAM3P40198 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CEACAM3P40198 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CEACAM3P40198 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 LINC02012-201ENST00000608206 1725 ntBASIC13.93□□□□□ -0.18
CEACAM3P40198 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CEACAM3P40198 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.92□□□□□ -0.18
CEACAM3P40198 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.92□□□□□ -0.18
CEACAM3P40198 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CEACAM3P40198 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CEACAM3P40198 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.92□□□□□ -0.18
CEACAM3P40198 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CEACAM3P40198 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 AP002414.1-201ENST00000391405 1147 ntBASIC13.92□□□□□ -0.18
CEACAM3P40198 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.92□□□□□ -0.18
CEACAM3P40198 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CEACAM3P40198 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.92□□□□□ -0.18
CEACAM3P40198 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.92□□□□□ -0.18
CEACAM3P40198 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.92□□□□□ -0.18
CEACAM3P40198 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CEACAM3P40198 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CEACAM3P40198 AL805961.1-202ENST00000641562 540 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms