Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.43■□□□□ 0.7
COPB2P35606 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.42■□□□□ 0.7
COPB2P35606 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.42■□□□□ 0.7
COPB2P35606 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COPB2P35606 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
COPB2P35606 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.42■□□□□ 0.7
COPB2P35606 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.42■□□□□ 0.7
COPB2P35606 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COPB2P35606 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.42■□□□□ 0.7
COPB2P35606 EGFEM1P-202ENST00000431685 1563 ntBASIC19.42■□□□□ 0.7
COPB2P35606 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.42■□□□□ 0.7
COPB2P35606 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.42■□□□□ 0.7
COPB2P35606 BCRP1-201ENST00000444246 691 ntBASIC19.42■□□□□ 0.7
COPB2P35606 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.42■□□□□ 0.7
COPB2P35606 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.42■□□□□ 0.7
COPB2P35606 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.42■□□□□ 0.7
COPB2P35606 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.42■□□□□ 0.7
COPB2P35606 MIR3909-201ENST00000579518 119 ntBASIC19.42■□□□□ 0.7
COPB2P35606 AP001059.3-201ENST00000619053 235 ntBASIC19.42■□□□□ 0.7
COPB2P35606 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COPB2P35606 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COPB2P35606 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
COPB2P35606 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
COPB2P35606 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COPB2P35606 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.42■□□□□ 0.7
COPB2P35606 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COPB2P35606 AC016396.2-201ENST00000562575 1417 ntBASIC19.42■□□□□ 0.7
COPB2P35606 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COPB2P35606 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
COPB2P35606 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPB2P35606 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPB2P35606 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.41■□□□□ 0.7
COPB2P35606 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPB2P35606 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
COPB2P35606 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPB2P35606 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.41■□□□□ 0.7
COPB2P35606 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.41■□□□□ 0.7
COPB2P35606 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.41■□□□□ 0.7
COPB2P35606 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.41■□□□□ 0.7
COPB2P35606 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPB2P35606 DUX4L17-201ENST00000557360 1267 ntBASIC19.41■□□□□ 0.7
COPB2P35606 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.41■□□□□ 0.7
COPB2P35606 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPB2P35606 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPB2P35606 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
COPB2P35606 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPB2P35606 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPB2P35606 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
COPB2P35606 TOP3BP1-201ENST00000420768 1380 ntBASIC19.41■□□□□ 0.7
COPB2P35606 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPB2P35606 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.41■□□□□ 0.7
COPB2P35606 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
COPB2P35606 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPB2P35606 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COPB2P35606 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COPB2P35606 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPB2P35606 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPB2P35606 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.4■□□□□ 0.7
COPB2P35606 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.4■□□□□ 0.7
COPB2P35606 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPB2P35606 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPB2P35606 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.4■□□□□ 0.7
COPB2P35606 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPB2P35606 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPB2P35606 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COPB2P35606 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPB2P35606 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.4■□□□□ 0.7
COPB2P35606 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.4■□□□□ 0.7
COPB2P35606 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.4■□□□□ 0.7
COPB2P35606 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.4■□□□□ 0.7
COPB2P35606 IGHV3-62-201ENST00000520057 340 ntBASIC19.4■□□□□ 0.7
COPB2P35606 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.4■□□□□ 0.7
COPB2P35606 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPB2P35606 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.4■□□□□ 0.7
COPB2P35606 AP001350.2-201ENST00000625104 1094 ntBASIC19.4■□□□□ 0.7
COPB2P35606 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.4■□□□□ 0.7
COPB2P35606 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.4■□□□□ 0.7
COPB2P35606 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPB2P35606 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPB2P35606 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPB2P35606 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPB2P35606 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPB2P35606 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPB2P35606 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
COPB2P35606 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms