Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
CTGFP29279 AC007431.3-201ENST00000623221 587 ntBASIC18.97■□□□□ 0.63
CTGFP29279 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTGFP29279 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.97■□□□□ 0.63
CTGFP29279 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTGFP29279 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTGFP29279 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTGFP29279 AC012317.2-201ENST00000623305 2251 ntBASIC18.97■□□□□ 0.63
CTGFP29279 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CTGFP29279 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.96■□□□□ 0.63
CTGFP29279 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.96■□□□□ 0.63
CTGFP29279 AC044860.1-202ENST00000559481 777 ntBASIC18.96■□□□□ 0.63
CTGFP29279 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.96■□□□□ 0.63
CTGFP29279 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.96■□□□□ 0.63
CTGFP29279 AL512343.1-201ENST00000605837 169 ntBASIC18.96■□□□□ 0.63
CTGFP29279 AC090164.3-201ENST00000610780 2143 ntBASIC18.96■□□□□ 0.63
CTGFP29279 SPTSSB-204ENST00000617024 1292 ntBASIC18.96■□□□□ 0.63
CTGFP29279 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.96■□□□□ 0.63
CTGFP29279 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.96■□□□□ 0.63
CTGFP29279 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.96■□□□□ 0.63
CTGFP29279 BTBD7P1-201ENST00000447253 1453 ntBASIC18.96■□□□□ 0.63
CTGFP29279 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTGFP29279 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CTGFP29279 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTGFP29279 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.95■□□□□ 0.62
CTGFP29279 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CTGFP29279 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTGFP29279 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTGFP29279 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTGFP29279 AC104581.1-202ENST00000635932 2618 ntBASIC18.95■□□□□ 0.62
CTGFP29279 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTGFP29279 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTGFP29279 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.95■□□□□ 0.62
CTGFP29279 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CTGFP29279 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.95■□□□□ 0.62
CTGFP29279 AC087499.6-201ENST00000411576 835 ntBASIC18.95■□□□□ 0.62
CTGFP29279 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.95■□□□□ 0.62
CTGFP29279 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.95■□□□□ 0.62
CTGFP29279 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.95■□□□□ 0.62
CTGFP29279 AC092552.1-201ENST00000547243 906 ntBASIC18.95■□□□□ 0.62
CTGFP29279 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
CTGFP29279 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.95■□□□□ 0.62
CTGFP29279 AC084346.2-201ENST00000607097 949 ntBASIC18.95■□□□□ 0.62
CTGFP29279 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTGFP29279 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CTGFP29279 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.95■□□□□ 0.62
CTGFP29279 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.95■□□□□ 0.62
CTGFP29279 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTGFP29279 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTGFP29279 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.95■□□□□ 0.62
CTGFP29279 AL355312.1-201ENST00000407115 2176 ntBASIC18.95■□□□□ 0.62
CTGFP29279 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CTGFP29279 REXO1L6P-201ENST00000603433 1515 ntBASIC18.95■□□□□ 0.62
CTGFP29279 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTGFP29279 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CTGFP29279 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.94■□□□□ 0.62
CTGFP29279 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTGFP29279 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.94■□□□□ 0.62
CTGFP29279 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTGFP29279 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.94■□□□□ 0.62
CTGFP29279 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTGFP29279 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.94■□□□□ 0.62
CTGFP29279 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
CTGFP29279 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CTGFP29279 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTGFP29279 AC073439.1-201ENST00000624121 1774 ntBASIC18.94■□□□□ 0.62
CTGFP29279 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.94■□□□□ 0.62
CTGFP29279 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTGFP29279 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CTGFP29279 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.94■□□□□ 0.62
CTGFP29279 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.94■□□□□ 0.62
CTGFP29279 AC011495.1-201ENST00000498085 584 ntBASIC18.94■□□□□ 0.62
CTGFP29279 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.94■□□□□ 0.62
CTGFP29279 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CTGFP29279 SNX29P1-201ENST00000548357 1007 ntBASIC18.94■□□□□ 0.62
CTGFP29279 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CTGFP29279 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTGFP29279 AL138781.2-201ENST00000617896 1843 ntBASIC18.94■□□□□ 0.62
CTGFP29279 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTGFP29279 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CTGFP29279 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.94■□□□□ 0.62
CTGFP29279 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.94■□□□□ 0.62
CTGFP29279 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTGFP29279 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTGFP29279 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.94■□□□□ 0.62
CTGFP29279 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms