Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
GDF1P27539 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
GDF1P27539 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
GDF1P27539 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
GDF1P27539 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
GDF1P27539 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.44■□□□□ 0.06
GDF1P27539 MCCD1P2-201ENST00000423228 335 ntBASIC15.44■□□□□ 0.06
GDF1P27539 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.44■□□□□ 0.06
GDF1P27539 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.44■□□□□ 0.06
GDF1P27539 FAM185BP-201ENST00000443595 716 ntBASIC15.44■□□□□ 0.06
GDF1P27539 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.44■□□□□ 0.06
GDF1P27539 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.44■□□□□ 0.06
GDF1P27539 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.44■□□□□ 0.06
GDF1P27539 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
GDF1P27539 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.44■□□□□ 0.06
GDF1P27539 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.44■□□□□ 0.06
GDF1P27539 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.44■□□□□ 0.06
GDF1P27539 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.44■□□□□ 0.06
GDF1P27539 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.44■□□□□ 0.06
GDF1P27539 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
GDF1P27539 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.44■□□□□ 0.06
GDF1P27539 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.44■□□□□ 0.06
GDF1P27539 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
GDF1P27539 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.43■□□□□ 0.06
GDF1P27539 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.43■□□□□ 0.06
GDF1P27539 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.43■□□□□ 0.06
GDF1P27539 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.43■□□□□ 0.06
GDF1P27539 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.43■□□□□ 0.06
GDF1P27539 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.43■□□□□ 0.06
GDF1P27539 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.43■□□□□ 0.06
GDF1P27539 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
GDF1P27539 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
GDF1P27539 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.43■□□□□ 0.06
GDF1P27539 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.43■□□□□ 0.06
GDF1P27539 SLC25A1P3-201ENST00000395415 828 ntBASIC15.43■□□□□ 0.06
GDF1P27539 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
GDF1P27539 AC112482.1-201ENST00000492080 688 ntBASIC15.43■□□□□ 0.06
GDF1P27539 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.43■□□□□ 0.06
GDF1P27539 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 ACTL9-202ENST00000612068 1252 ntBASIC15.43■□□□□ 0.06
GDF1P27539 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.43■□□□□ 0.06
GDF1P27539 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.43■□□□□ 0.06
GDF1P27539 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDF1P27539 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
GDF1P27539 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.43■□□□□ 0.06
GDF1P27539 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
GDF1P27539 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.42■□□□□ 0.06
GDF1P27539 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.42■□□□□ 0.06
GDF1P27539 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.42■□□□□ 0.06
GDF1P27539 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.42■□□□□ 0.06
GDF1P27539 AC107918.2-201ENST00000530817 355 ntBASIC15.42■□□□□ 0.06
GDF1P27539 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
GDF1P27539 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.42■□□□□ 0.06
GDF1P27539 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.42■□□□□ 0.06
GDF1P27539 AL078644.1-201ENST00000609881 752 ntBASIC15.42■□□□□ 0.06
GDF1P27539 AL691403.2-201ENST00000618460 490 ntBASIC15.42■□□□□ 0.06
GDF1P27539 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
GDF1P27539 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.42■□□□□ 0.06
GDF1P27539 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDF1P27539 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.42■□□□□ 0.06
GDF1P27539 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms