Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCND1P24385 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCND1P24385 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCND1P24385 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.23■□□□□ 0.35
CCND1P24385 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCND1P24385 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.23■□□□□ 0.35
CCND1P24385 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCND1P24385 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCND1P24385 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.23■□□□□ 0.35
CCND1P24385 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.23■□□□□ 0.35
CCND1P24385 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.23■□□□□ 0.35
CCND1P24385 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCND1P24385 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCND1P24385 AC009949.1-201ENST00000623048 1830 ntBASIC17.23■□□□□ 0.35
CCND1P24385 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.23■□□□□ 0.35
CCND1P24385 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCND1P24385 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCND1P24385 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCND1P24385 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.23■□□□□ 0.35
CCND1P24385 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.22■□□□□ 0.35
CCND1P24385 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCND1P24385 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.22■□□□□ 0.35
CCND1P24385 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
CCND1P24385 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCND1P24385 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCND1P24385 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CCND1P24385 DRAXINP1-201ENST00000437611 948 ntBASIC17.22■□□□□ 0.35
CCND1P24385 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.22■□□□□ 0.35
CCND1P24385 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.22■□□□□ 0.35
CCND1P24385 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCND1P24385 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.22■□□□□ 0.35
CCND1P24385 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.22■□□□□ 0.35
CCND1P24385 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.22■□□□□ 0.35
CCND1P24385 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CCND1P24385 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.22■□□□□ 0.35
CCND1P24385 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.22■□□□□ 0.35
CCND1P24385 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCND1P24385 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CCND1P24385 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCND1P24385 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CCND1P24385 KRT18P1-202ENST00000452408 1331 ntBASIC17.21■□□□□ 0.35
CCND1P24385 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.21■□□□□ 0.35
CCND1P24385 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 AC005915.1-201ENST00000624912 2018 ntBASIC17.21■□□□□ 0.35
CCND1P24385 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CCND1P24385 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCND1P24385 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.21■□□□□ 0.35
CCND1P24385 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 LINC00304-203ENST00000565008 1864 ntBASIC17.21■□□□□ 0.35
CCND1P24385 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.21■□□□□ 0.35
CCND1P24385 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.21■□□□□ 0.35
CCND1P24385 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.21■□□□□ 0.35
CCND1P24385 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.21■□□□□ 0.35
CCND1P24385 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCND1P24385 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.21■□□□□ 0.35
CCND1P24385 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.21■□□□□ 0.35
CCND1P24385 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCND1P24385 AC104640.1-201ENST00000562617 2109 ntBASIC17.21■□□□□ 0.35
CCND1P24385 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 HLA-J-201ENST00000462773 1622 ntBASIC17.21■□□□□ 0.35
CCND1P24385 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCND1P24385 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CCND1P24385 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CCND1P24385 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
CCND1P24385 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms