Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDH3P22223 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH3P22223 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH3P22223 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.78■□□□□ 0.28
CDH3P22223 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH3P22223 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH3P22223 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH3P22223 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.78■□□□□ 0.28
CDH3P22223 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 AL589182.2-201ENST00000619332 1049 ntBASIC16.78■□□□□ 0.28
CDH3P22223 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.78■□□□□ 0.28
CDH3P22223 LINC01451-201ENST00000623792 534 ntBASIC16.78■□□□□ 0.28
CDH3P22223 AF228730.7-201ENST00000641842 219 ntBASIC16.78■□□□□ 0.28
CDH3P22223 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDH3P22223 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDH3P22223 NCF1C-201ENST00000438382 1427 ntBASIC16.78■□□□□ 0.28
CDH3P22223 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH3P22223 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH3P22223 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH3P22223 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH3P22223 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH3P22223 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH3P22223 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH3P22223 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH3P22223 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH3P22223 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CDH3P22223 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CDH3P22223 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.77■□□□□ 0.28
CDH3P22223 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.77■□□□□ 0.28
CDH3P22223 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.77■□□□□ 0.28
CDH3P22223 AC098831.1-202ENST00000438821 336 ntBASIC16.77■□□□□ 0.28
CDH3P22223 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.77■□□□□ 0.28
CDH3P22223 RPL13AP23-201ENST00000480739 586 ntBASIC16.77■□□□□ 0.28
CDH3P22223 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH3P22223 SLC25A1P1-201ENST00000528351 927 ntBASIC16.77■□□□□ 0.28
CDH3P22223 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH3P22223 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH3P22223 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH3P22223 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.77■□□□□ 0.28
CDH3P22223 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH3P22223 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH3P22223 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH3P22223 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH3P22223 AP002414.3-201ENST00000589352 1468 ntBASIC16.77■□□□□ 0.28
CDH3P22223 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH3P22223 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH3P22223 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH3P22223 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.77■□□□□ 0.27
CDH3P22223 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH3P22223 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.27
CDH3P22223 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH3P22223 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH3P22223 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.77■□□□□ 0.27
CDH3P22223 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH3P22223 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDH3P22223 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH3P22223 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH3P22223 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDH3P22223 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH3P22223 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH3P22223 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH3P22223 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDH3P22223 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH3P22223 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
CDH3P22223 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH3P22223 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH3P22223 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDH3P22223 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH3P22223 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH3P22223 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDH3P22223 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH3P22223 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH3P22223 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CDH3P22223 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH3P22223 AC006116.8-202ENST00000587620 1550 ntBASIC16.76■□□□□ 0.27
CDH3P22223 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH3P22223 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH3P22223 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDH3P22223 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH3P22223 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH3P22223 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH3P22223 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH3P22223 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.75■□□□□ 0.27
CDH3P22223 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms