Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNA3P22001 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA3P22001 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA3P22001 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNA3P22001 LINC00304-203ENST00000565008 1864 ntBASIC20.63■□□□□ 0.89
KCNA3P22001 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
KCNA3P22001 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA3P22001 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KCNA3P22001 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA3P22001 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNA3P22001 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNA3P22001 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA3P22001 KRT18P34-201ENST00000488218 1270 ntBASIC20.63■□□□□ 0.89
KCNA3P22001 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.63■□□□□ 0.89
KCNA3P22001 AL512361.1-201ENST00000554200 418 ntBASIC20.63■□□□□ 0.89
KCNA3P22001 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNA3P22001 MIR4538-201ENST00000581377 78 ntBASIC20.63■□□□□ 0.89
KCNA3P22001 AC021097.1-201ENST00000607902 574 ntBASIC20.63■□□□□ 0.89
KCNA3P22001 AC099568.2-201ENST00000609194 695 ntBASIC20.63■□□□□ 0.89
KCNA3P22001 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
KCNA3P22001 AP001350.2-201ENST00000625104 1094 ntBASIC20.63■□□□□ 0.89
KCNA3P22001 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNA3P22001 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNA3P22001 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNA3P22001 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA3P22001 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.63■□□□□ 0.89
KCNA3P22001 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNA3P22001 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
KCNA3P22001 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
KCNA3P22001 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA3P22001 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNA3P22001 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA3P22001 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
KCNA3P22001 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.63■□□□□ 0.89
KCNA3P22001 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA3P22001 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
KCNA3P22001 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA3P22001 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA3P22001 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
KCNA3P22001 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA3P22001 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNA3P22001 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNA3P22001 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.62■□□□□ 0.89
KCNA3P22001 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.62■□□□□ 0.89
KCNA3P22001 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KCNA3P22001 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
KCNA3P22001 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KCNA3P22001 TTTY23B-201ENST00000442790 549 ntBASIC20.62■□□□□ 0.89
KCNA3P22001 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNA3P22001 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.62■□□□□ 0.89
KCNA3P22001 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNA3P22001 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 CTBP2P3-201ENST00000585629 1255 ntBASIC20.62■□□□□ 0.89
KCNA3P22001 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNA3P22001 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNA3P22001 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
KCNA3P22001 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KCNA3P22001 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KCNA3P22001 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KCNA3P22001 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNA3P22001 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.62■□□□□ 0.89
KCNA3P22001 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNA3P22001 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNA3P22001 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.61■□□□□ 0.89
KCNA3P22001 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KCNA3P22001 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KCNA3P22001 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNA3P22001 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.61■□□□□ 0.89
KCNA3P22001 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
KCNA3P22001 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNA3P22001 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
KCNA3P22001 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNA3P22001 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNA3P22001 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNA3P22001 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.61■□□□□ 0.89
KCNA3P22001 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.61■□□□□ 0.89
KCNA3P22001 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.61■□□□□ 0.89
KCNA3P22001 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.61■□□□□ 0.89
KCNA3P22001 PRYP6-201ENST00000514804 343 ntBASIC20.61■□□□□ 0.89
KCNA3P22001 AC044860.1-202ENST00000559481 777 ntBASIC20.61■□□□□ 0.89
KCNA3P22001 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNA3P22001 MIR4492-201ENST00000581627 80 ntBASIC20.61■□□□□ 0.89
KCNA3P22001 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.61■□□□□ 0.89
KCNA3P22001 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KCNA3P22001 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNA3P22001 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms