Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.46■□□□□ 0.23
CAPN3P20807 AC122714.2-201ENST00000502787 707 ntBASIC16.46■□□□□ 0.23
CAPN3P20807 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CAPN3P20807 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN3P20807 AL160237.2-201ENST00000556165 472 ntBASIC16.46■□□□□ 0.23
CAPN3P20807 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.46■□□□□ 0.23
CAPN3P20807 STK25P1-201ENST00000585406 838 ntBASIC16.46■□□□□ 0.23
CAPN3P20807 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.46■□□□□ 0.23
CAPN3P20807 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.46■□□□□ 0.23
CAPN3P20807 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.46■□□□□ 0.23
CAPN3P20807 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN3P20807 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN3P20807 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN3P20807 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN3P20807 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.46■□□□□ 0.23
CAPN3P20807 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN3P20807 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN3P20807 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CAPN3P20807 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN3P20807 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.46■□□□□ 0.23
CAPN3P20807 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN3P20807 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.46■□□□□ 0.23
CAPN3P20807 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.46■□□□□ 0.23
CAPN3P20807 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.46■□□□□ 0.23
CAPN3P20807 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN3P20807 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CAPN3P20807 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CAPN3P20807 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CAPN3P20807 AC092364.2-201ENST00000596710 2692 ntBASIC16.45■□□□□ 0.22
CAPN3P20807 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.45■□□□□ 0.22
CAPN3P20807 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
CAPN3P20807 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.45■□□□□ 0.22
CAPN3P20807 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.45■□□□□ 0.22
CAPN3P20807 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.45■□□□□ 0.22
CAPN3P20807 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.45■□□□□ 0.22
CAPN3P20807 UNC93B7-201ENST00000509439 705 ntBASIC16.45■□□□□ 0.22
CAPN3P20807 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CAPN3P20807 AL135999.2-201ENST00000622438 1686 ntBASIC16.45■□□□□ 0.22
CAPN3P20807 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.45■□□□□ 0.22
CAPN3P20807 HLA-A-202ENST00000376806 1854 ntBASIC16.45■□□□□ 0.22
CAPN3P20807 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.45■□□□□ 0.22
CAPN3P20807 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CAPN3P20807 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.45■□□□□ 0.22
CAPN3P20807 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CAPN3P20807 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN3P20807 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN3P20807 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN3P20807 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CAPN3P20807 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN3P20807 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN3P20807 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN3P20807 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN3P20807 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.44■□□□□ 0.22
CAPN3P20807 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN3P20807 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.44■□□□□ 0.22
CAPN3P20807 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.44■□□□□ 0.22
CAPN3P20807 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.44■□□□□ 0.22
CAPN3P20807 SPDYE13P-201ENST00000445314 798 ntBASIC16.44■□□□□ 0.22
CAPN3P20807 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.44■□□□□ 0.22
CAPN3P20807 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.44■□□□□ 0.22
CAPN3P20807 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN3P20807 AL662844.1-201ENST00000546340 181 ntBASIC16.44■□□□□ 0.22
CAPN3P20807 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.44■□□□□ 0.22
CAPN3P20807 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CAPN3P20807 AC011498.5-201ENST00000592027 486 ntBASIC16.44■□□□□ 0.22
CAPN3P20807 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN3P20807 AL121772.3-201ENST00000610840 674 ntBASIC16.44■□□□□ 0.22
CAPN3P20807 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CAPN3P20807 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.44■□□□□ 0.22
CAPN3P20807 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.44■□□□□ 0.22
CAPN3P20807 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN3P20807 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.44■□□□□ 0.22
CAPN3P20807 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN3P20807 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.44■□□□□ 0.22
CAPN3P20807 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CAPN3P20807 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.44■□□□□ 0.22
CAPN3P20807 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CAPN3P20807 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CAPN3P20807 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN3P20807 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms