Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 PVRIG2P-201ENST00000435460 978 ntBASIC17.72■□□□□ 0.43
H2AFXP16104 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.72■□□□□ 0.43
H2AFXP16104 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.72■□□□□ 0.43
H2AFXP16104 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.72■□□□□ 0.43
H2AFXP16104 AC073195.1-201ENST00000607241 877 ntBASIC17.72■□□□□ 0.43
H2AFXP16104 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.72■□□□□ 0.43
H2AFXP16104 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
H2AFXP16104 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
H2AFXP16104 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.72■□□□□ 0.43
H2AFXP16104 CDC14C-201ENST00000428251 1719 ntBASIC17.72■□□□□ 0.43
H2AFXP16104 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
H2AFXP16104 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
H2AFXP16104 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.72■□□□□ 0.43
H2AFXP16104 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
H2AFXP16104 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H2AFXP16104 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2AFXP16104 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2AFXP16104 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
H2AFXP16104 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.71■□□□□ 0.43
H2AFXP16104 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.71■□□□□ 0.43
H2AFXP16104 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
H2AFXP16104 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2AFXP16104 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2AFXP16104 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
H2AFXP16104 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.71■□□□□ 0.43
H2AFXP16104 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.71■□□□□ 0.43
H2AFXP16104 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
H2AFXP16104 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.71■□□□□ 0.43
H2AFXP16104 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2AFXP16104 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2AFXP16104 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
H2AFXP16104 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.71■□□□□ 0.43
H2AFXP16104 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.71■□□□□ 0.43
H2AFXP16104 AL023803.3-201ENST00000615559 522 ntBASIC17.71■□□□□ 0.43
H2AFXP16104 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
H2AFXP16104 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2AFXP16104 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.71■□□□□ 0.43
H2AFXP16104 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.71■□□□□ 0.43
H2AFXP16104 SSR4P1-203ENST00000599569 2260 ntBASIC17.71■□□□□ 0.43
H2AFXP16104 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
H2AFXP16104 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2AFXP16104 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2AFXP16104 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
H2AFXP16104 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.71■□□□□ 0.43
H2AFXP16104 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2AFXP16104 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
H2AFXP16104 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2AFXP16104 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.71■□□□□ 0.43
H2AFXP16104 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
H2AFXP16104 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.71■□□□□ 0.42
H2AFXP16104 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
H2AFXP16104 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
H2AFXP16104 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
H2AFXP16104 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.7■□□□□ 0.42
H2AFXP16104 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.7■□□□□ 0.42
H2AFXP16104 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 AC005089.1-201ENST00000619486 2241 ntBASIC17.7■□□□□ 0.42
H2AFXP16104 LINC00895-201ENST00000629028 1637 ntBASIC17.7■□□□□ 0.42
H2AFXP16104 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 AC106881.1-201ENST00000605849 3329 ntBASIC17.7■□□□□ 0.42
H2AFXP16104 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
H2AFXP16104 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.7■□□□□ 0.42
H2AFXP16104 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.7■□□□□ 0.42
H2AFXP16104 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.7■□□□□ 0.42
H2AFXP16104 AL138781.1-201ENST00000566567 1274 ntBASIC17.7■□□□□ 0.42
H2AFXP16104 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
H2AFXP16104 AC019129.2-201ENST00000609837 1235 ntBASIC17.7■□□□□ 0.42
H2AFXP16104 AC009154.2-201ENST00000621177 724 ntBASIC17.7■□□□□ 0.42
H2AFXP16104 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.7■□□□□ 0.42
H2AFXP16104 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
H2AFXP16104 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
H2AFXP16104 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 AC016027.1-202ENST00000607927 1699 ntBASIC17.7■□□□□ 0.42
H2AFXP16104 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
H2AFXP16104 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.7■□□□□ 0.42
H2AFXP16104 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H2AFXP16104 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.69■□□□□ 0.42
H2AFXP16104 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2AFXP16104 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.69■□□□□ 0.42
H2AFXP16104 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
H2AFXP16104 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2AFXP16104 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2AFXP16104 AC002310.6-201ENST00000624451 1377 ntBASIC17.69■□□□□ 0.42
H2AFXP16104 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2AFXP16104 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms