Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.67■□□□□ 0.58
CLTAP09496 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.67■□□□□ 0.58
CLTAP09496 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLTAP09496 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLTAP09496 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.67■□□□□ 0.58
CLTAP09496 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLTAP09496 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
CLTAP09496 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.67■□□□□ 0.58
CLTAP09496 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.67■□□□□ 0.58
CLTAP09496 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CLTAP09496 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 AC116353.5-201ENST00000638148 1699 ntBASIC18.66■□□□□ 0.58
CLTAP09496 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.66■□□□□ 0.58
CLTAP09496 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.66■□□□□ 0.58
CLTAP09496 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CLTAP09496 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 SLC25A1P3-201ENST00000395415 828 ntBASIC18.66■□□□□ 0.58
CLTAP09496 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.66■□□□□ 0.58
CLTAP09496 PRSS29P-201ENST00000440800 595 ntBASIC18.66■□□□□ 0.58
CLTAP09496 AL591424.1-201ENST00000442569 1213 ntBASIC18.66■□□□□ 0.58
CLTAP09496 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.66■□□□□ 0.58
CLTAP09496 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLTAP09496 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.66■□□□□ 0.58
CLTAP09496 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.66■□□□□ 0.58
CLTAP09496 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.66■□□□□ 0.58
CLTAP09496 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.66■□□□□ 0.58
CLTAP09496 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLTAP09496 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.66■□□□□ 0.58
CLTAP09496 AC004790.2-201ENST00000623588 572 ntBASIC18.66■□□□□ 0.58
CLTAP09496 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLTAP09496 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.66■□□□□ 0.58
CLTAP09496 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CLTAP09496 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.66■□□□□ 0.58
CLTAP09496 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.66■□□□□ 0.58
CLTAP09496 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLTAP09496 AC093525.9-201ENST00000624961 1746 ntBASIC18.66■□□□□ 0.58
CLTAP09496 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLTAP09496 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLTAP09496 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLTAP09496 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CLTAP09496 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CLTAP09496 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 MRPL20P1-201ENST00000400819 433 ntBASIC18.65■□□□□ 0.58
CLTAP09496 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.65■□□□□ 0.58
CLTAP09496 PAWRP1-201ENST00000451083 565 ntBASIC18.65■□□□□ 0.58
CLTAP09496 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.65■□□□□ 0.58
CLTAP09496 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.65■□□□□ 0.58
CLTAP09496 FAM197Y3-203ENST00000618346 717 ntBASIC18.65■□□□□ 0.58
CLTAP09496 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CLTAP09496 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.65■□□□□ 0.58
CLTAP09496 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLTAP09496 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.64■□□□□ 0.58
CLTAP09496 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLTAP09496 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.64■□□□□ 0.58
CLTAP09496 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.64■□□□□ 0.58
CLTAP09496 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLTAP09496 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms