Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.9■□□□□ 0.46
RB1P06400 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.89■□□□□ 0.46
RB1P06400 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.89■□□□□ 0.46
RB1P06400 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RB1P06400 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RB1P06400 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
RB1P06400 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.89■□□□□ 0.45
RB1P06400 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RB1P06400 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.89■□□□□ 0.45
RB1P06400 AC090164.3-201ENST00000610780 2143 ntBASIC17.89■□□□□ 0.45
RB1P06400 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RB1P06400 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RB1P06400 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RB1P06400 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.89■□□□□ 0.45
RB1P06400 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.89■□□□□ 0.45
RB1P06400 HLA-V-201ENST00000429037 534 ntBASIC17.89■□□□□ 0.45
RB1P06400 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.89■□□□□ 0.45
RB1P06400 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RB1P06400 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.89■□□□□ 0.45
RB1P06400 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.89■□□□□ 0.45
RB1P06400 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.89■□□□□ 0.45
RB1P06400 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RB1P06400 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.89■□□□□ 0.45
RB1P06400 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RB1P06400 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.89■□□□□ 0.45
RB1P06400 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RB1P06400 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RB1P06400 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RB1P06400 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.89■□□□□ 0.45
RB1P06400 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RB1P06400 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RB1P06400 AL035456.1-201ENST00000456064 1369 ntBASIC17.89■□□□□ 0.45
RB1P06400 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RB1P06400 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RB1P06400 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.89■□□□□ 0.45
RB1P06400 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RB1P06400 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RB1P06400 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RB1P06400 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RB1P06400 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.88■□□□□ 0.45
RB1P06400 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RB1P06400 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RB1P06400 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
RB1P06400 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.88■□□□□ 0.45
RB1P06400 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.88■□□□□ 0.45
RB1P06400 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.88■□□□□ 0.45
RB1P06400 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.88■□□□□ 0.45
RB1P06400 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RB1P06400 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.88■□□□□ 0.45
RB1P06400 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.88■□□□□ 0.45
RB1P06400 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.88■□□□□ 0.45
RB1P06400 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
RB1P06400 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RB1P06400 AC131009.4-201ENST00000624048 1740 ntBASIC17.88■□□□□ 0.45
RB1P06400 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.88■□□□□ 0.45
RB1P06400 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.88■□□□□ 0.45
RB1P06400 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.88■□□□□ 0.45
RB1P06400 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
RB1P06400 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.88■□□□□ 0.45
RB1P06400 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RB1P06400 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.88■□□□□ 0.45
RB1P06400 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RB1P06400 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RB1P06400 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RB1P06400 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RB1P06400 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RB1P06400 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RB1P06400 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RB1P06400 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RB1P06400 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RB1P06400 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RB1P06400 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RB1P06400 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RB1P06400 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RB1P06400 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RB1P06400 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.87■□□□□ 0.45
RB1P06400 KRT18P34-201ENST00000488218 1270 ntBASIC17.87■□□□□ 0.45
RB1P06400 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.87■□□□□ 0.45
RB1P06400 TP53TG3HP-202ENST00000569755 579 ntBASIC17.87■□□□□ 0.45
RB1P06400 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.87■□□□□ 0.45
RB1P06400 MPDU1-223ENST00000582151 728 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms