Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AC020916.1-201ENST00000587762 1774 ntBASIC20.47■□□□□ 0.87
APPP05067 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
APPP05067 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.47■□□□□ 0.87
APPP05067 AC012313.1-201ENST00000593393 3059 ntBASIC20.47■□□□□ 0.87
APPP05067 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
APPP05067 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APPP05067 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
APPP05067 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APPP05067 MRPL20P1-201ENST00000400819 433 ntBASIC20.47■□□□□ 0.87
APPP05067 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.47■□□□□ 0.87
APPP05067 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.47■□□□□ 0.87
APPP05067 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.47■□□□□ 0.87
APPP05067 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APPP05067 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.47■□□□□ 0.87
APPP05067 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
APPP05067 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.47■□□□□ 0.87
APPP05067 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
APPP05067 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.47■□□□□ 0.87
APPP05067 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
APPP05067 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
APPP05067 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.46■□□□□ 0.87
APPP05067 AC108860.2-201ENST00000562760 2183 ntBASIC20.46■□□□□ 0.87
APPP05067 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.46■□□□□ 0.87
APPP05067 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.46■□□□□ 0.87
APPP05067 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.46■□□□□ 0.87
APPP05067 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
APPP05067 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APPP05067 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
APPP05067 AL645608.8-201ENST00000606034 2086 ntBASIC20.46■□□□□ 0.87
APPP05067 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APPP05067 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APPP05067 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APPP05067 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APPP05067 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
APPP05067 CRYGEP-201ENST00000412192 528 ntBASIC20.46■□□□□ 0.87
APPP05067 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.46■□□□□ 0.87
APPP05067 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
APPP05067 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APPP05067 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
APPP05067 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APPP05067 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
APPP05067 AL139384.1-201ENST00000612143 3047 ntBASIC20.46■□□□□ 0.87
APPP05067 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
APPP05067 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
APPP05067 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APPP05067 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
APPP05067 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.45■□□□□ 0.87
APPP05067 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APPP05067 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APPP05067 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
APPP05067 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
APPP05067 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
APPP05067 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.45■□□□□ 0.86
APPP05067 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
APPP05067 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
APPP05067 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
APPP05067 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.45■□□□□ 0.86
APPP05067 POLD2P1-201ENST00000511220 997 ntBASIC20.45■□□□□ 0.86
APPP05067 KRT18P58-201ENST00000527480 1120 ntBASIC20.45■□□□□ 0.86
APPP05067 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
APPP05067 AC027601.4-201ENST00000611259 610 ntBASIC20.45■□□□□ 0.86
APPP05067 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.45■□□□□ 0.86
APPP05067 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.45■□□□□ 0.86
APPP05067 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APPP05067 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
APPP05067 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
APPP05067 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
APPP05067 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
APPP05067 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
APPP05067 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.45■□□□□ 0.86
APPP05067 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
APPP05067 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
APPP05067 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
APPP05067 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
APPP05067 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 MED15P5-201ENST00000423150 992 ntBASIC20.44■□□□□ 0.86
APPP05067 PAWRP1-201ENST00000451083 565 ntBASIC20.44■□□□□ 0.86
APPP05067 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.44■□□□□ 0.86
APPP05067 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.44■□□□□ 0.86
APPP05067 AC140113.2-201ENST00000604370 208 ntBASIC20.44■□□□□ 0.86
APPP05067 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.44■□□□□ 0.86
APPP05067 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.44■□□□□ 0.86
APPP05067 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APPP05067 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
APPP05067 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms