Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC112482.1-201ENST00000492080 688 ntBASIC15.55■□□□□ 0.08
P04436 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.55■□□□□ 0.08
P04436 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.55■□□□□ 0.08
P04436 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.55■□□□□ 0.08
P04436 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.55■□□□□ 0.08
P04436 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.55■□□□□ 0.08
P04436 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.55■□□□□ 0.08
P04436 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.55■□□□□ 0.08
P04436 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
P04436 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.55■□□□□ 0.08
P04436 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.54■□□□□ 0.08
P04436 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
P04436 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
P04436 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.54■□□□□ 0.08
P04436 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
P04436 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
P04436 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.54■□□□□ 0.08
P04436 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
P04436 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.54■□□□□ 0.08
P04436 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.54■□□□□ 0.08
P04436 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
P04436 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.54■□□□□ 0.08
P04436 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.54■□□□□ 0.08
P04436 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.54■□□□□ 0.08
P04436 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
P04436 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
P04436 AC005829.1-201ENST00000570002 483 ntBASIC15.54■□□□□ 0.08
P04436 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.54■□□□□ 0.08
P04436 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.54■□□□□ 0.08
P04436 ACTL9-202ENST00000612068 1252 ntBASIC15.54■□□□□ 0.08
P04436 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.54■□□□□ 0.08
P04436 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.54■□□□□ 0.08
P04436 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
P04436 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
P04436 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
P04436 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.54■□□□□ 0.08
P04436 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
P04436 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
P04436 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04436 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
P04436 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
P04436 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.53■□□□□ 0.08
P04436 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.53■□□□□ 0.08
P04436 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.53■□□□□ 0.08
P04436 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.53■□□□□ 0.08
P04436 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
P04436 FZD10-202ENST00000539839 3282 ntBASIC15.53■□□□□ 0.08
P04436 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
P04436 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
P04436 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
P04436 AL021920.2-201ENST00000624828 1351 ntBASIC15.53■□□□□ 0.08
P04436 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.53■□□□□ 0.08
P04436 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
P04436 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.53■□□□□ 0.08
P04436 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 SLC25A1P3-201ENST00000395415 828 ntBASIC15.53■□□□□ 0.08
P04436 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
P04436 AC005412.3-201ENST00000580309 715 ntBASIC15.53■□□□□ 0.08
P04436 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.53■□□□□ 0.08
P04436 C20orf181-201ENST00000623918 480 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms