Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND3P03897 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
MT-ND3P03897 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND3P03897 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND3P03897 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND3P03897 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND3P03897 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND3P03897 MYCLP1-201ENST00000372451 1075 ntBASIC17.43■□□□□ 0.38
MT-ND3P03897 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.43■□□□□ 0.38
MT-ND3P03897 COX5BP2-201ENST00000392354 334 ntBASIC17.43■□□□□ 0.38
MT-ND3P03897 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.43■□□□□ 0.38
MT-ND3P03897 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.43■□□□□ 0.38
MT-ND3P03897 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.43■□□□□ 0.38
MT-ND3P03897 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.43■□□□□ 0.38
MT-ND3P03897 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MT-ND3P03897 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.43■□□□□ 0.38
MT-ND3P03897 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.43■□□□□ 0.38
MT-ND3P03897 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.43■□□□□ 0.38
MT-ND3P03897 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND3P03897 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.43■□□□□ 0.38
MT-ND3P03897 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.43■□□□□ 0.38
MT-ND3P03897 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
MT-ND3P03897 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.43■□□□□ 0.38
MT-ND3P03897 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.43■□□□□ 0.38
MT-ND3P03897 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND3P03897 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND3P03897 AL139384.1-201ENST00000612143 3047 ntBASIC17.43■□□□□ 0.38
MT-ND3P03897 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MT-ND3P03897 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND3P03897 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.43■□□□□ 0.38
MT-ND3P03897 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.43■□□□□ 0.38
MT-ND3P03897 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
MT-ND3P03897 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.43■□□□□ 0.38
MT-ND3P03897 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND3P03897 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MT-ND3P03897 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MT-ND3P03897 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.42■□□□□ 0.38
MT-ND3P03897 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
MT-ND3P03897 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.42■□□□□ 0.38
MT-ND3P03897 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MT-ND3P03897 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 AL353692.3-201ENST00000407031 1396 ntBASIC17.42■□□□□ 0.38
MT-ND3P03897 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.42■□□□□ 0.38
MT-ND3P03897 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.42■□□□□ 0.38
MT-ND3P03897 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 AC092068.3-201ENST00000587894 2016 ntBASIC17.42■□□□□ 0.38
MT-ND3P03897 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 IGHGP-201ENST00000390555 1178 ntBASIC17.42■□□□□ 0.38
MT-ND3P03897 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.42■□□□□ 0.38
MT-ND3P03897 TOB2P1-201ENST00000469761 992 ntBASIC17.42■□□□□ 0.38
MT-ND3P03897 VENTXP7-201ENST00000475503 772 ntBASIC17.42■□□□□ 0.38
MT-ND3P03897 AC104819.1-201ENST00000504587 486 ntBASIC17.42■□□□□ 0.38
MT-ND3P03897 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.42■□□□□ 0.38
MT-ND3P03897 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.42■□□□□ 0.38
MT-ND3P03897 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 Z69720.1-201ENST00000601483 472 ntBASIC17.42■□□□□ 0.38
MT-ND3P03897 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.42■□□□□ 0.38
MT-ND3P03897 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.42■□□□□ 0.38
MT-ND3P03897 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.42■□□□□ 0.38
MT-ND3P03897 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MT-ND3P03897 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
MT-ND3P03897 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.42■□□□□ 0.38
MT-ND3P03897 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MT-ND3P03897 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
MT-ND3P03897 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-ND3P03897 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.42■□□□□ 0.38
MT-ND3P03897 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MT-ND3P03897 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.41■□□□□ 0.38
MT-ND3P03897 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.41■□□□□ 0.38
MT-ND3P03897 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.41■□□□□ 0.38
MT-ND3P03897 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.41■□□□□ 0.38
MT-ND3P03897 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
MT-ND3P03897 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 IGHV3-52-201ENST00000519770 353 ntBASIC17.41■□□□□ 0.38
MT-ND3P03897 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.41■□□□□ 0.38
MT-ND3P03897 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.41■□□□□ 0.38
MT-ND3P03897 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.41■□□□□ 0.38
MT-ND3P03897 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.41■□□□□ 0.38
MT-ND3P03897 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-ND3P03897 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms