Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.57■□□□□ 0.24
KRT6AP02538 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT6AP02538 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT6AP02538 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.57■□□□□ 0.24
KRT6AP02538 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.57■□□□□ 0.24
KRT6AP02538 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
KRT6AP02538 SPDYE21P-201ENST00000413323 827 ntBASIC16.57■□□□□ 0.24
KRT6AP02538 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT6AP02538 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT6AP02538 AC099336.1-202ENST00000602961 463 ntBASIC16.57■□□□□ 0.24
KRT6AP02538 NPAP1P7-201ENST00000613027 823 ntBASIC16.57■□□□□ 0.24
KRT6AP02538 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT6AP02538 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
KRT6AP02538 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.57■□□□□ 0.24
KRT6AP02538 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.57■□□□□ 0.24
KRT6AP02538 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
KRT6AP02538 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KRT6AP02538 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
KRT6AP02538 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
KRT6AP02538 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 FLJ38576-201ENST00000623820 2459 ntBASIC16.56■□□□□ 0.24
KRT6AP02538 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
KRT6AP02538 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
KRT6AP02538 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KRT6AP02538 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
KRT6AP02538 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT6AP02538 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT6AP02538 ATP5G2P1-201ENST00000433580 426 ntBASIC16.56■□□□□ 0.24
KRT6AP02538 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.56■□□□□ 0.24
KRT6AP02538 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 ABCD1P5-201ENST00000445663 754 ntBASIC16.56■□□□□ 0.24
KRT6AP02538 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.56■□□□□ 0.24
KRT6AP02538 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT6AP02538 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.56■□□□□ 0.24
KRT6AP02538 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.56■□□□□ 0.24
KRT6AP02538 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT6AP02538 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
KRT6AP02538 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.56■□□□□ 0.24
KRT6AP02538 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT6AP02538 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
KRT6AP02538 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
KRT6AP02538 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT6AP02538 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
KRT6AP02538 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KRT6AP02538 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
KRT6AP02538 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT6AP02538 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.56■□□□□ 0.24
KRT6AP02538 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT6AP02538 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.56■□□□□ 0.24
KRT6AP02538 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KRT6AP02538 PCDHA14-201ENST00000506751 2298 ntBASIC16.56■□□□□ 0.24
KRT6AP02538 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
KRT6AP02538 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT6AP02538 AL162727.3-201ENST00000635661 2787 ntBASIC16.55■□□□□ 0.24
KRT6AP02538 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
KRT6AP02538 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT6AP02538 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT6AP02538 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 SIGLEC16-201ENST00000599858 1437 ntBASIC16.55■□□□□ 0.24
KRT6AP02538 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KRT6AP02538 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT6AP02538 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms