Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRBC1P01850 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBC1P01850 AP000347.1-202ENST00000435868 847 ntBASIC17.07■□□□□ 0.32
TRBC1P01850 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBC1P01850 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.07■□□□□ 0.32
TRBC1P01850 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBC1P01850 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBC1P01850 REXO1L3P-201ENST00000622202 1288 ntBASIC17.07■□□□□ 0.32
TRBC1P01850 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRBC1P01850 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBC1P01850 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBC1P01850 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBC1P01850 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBC1P01850 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBC1P01850 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBC1P01850 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBC1P01850 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
TRBC1P01850 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBC1P01850 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBC1P01850 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRBC1P01850 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBC1P01850 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
TRBC1P01850 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 AC129492.6-201ENST00000611383 1305 ntBASIC17.06■□□□□ 0.32
TRBC1P01850 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBC1P01850 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBC1P01850 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRBC1P01850 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
TRBC1P01850 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TRBC1P01850 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBC1P01850 HCG4B-203ENST00000450128 991 ntBASIC17.06■□□□□ 0.32
TRBC1P01850 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.06■□□□□ 0.32
TRBC1P01850 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.06■□□□□ 0.32
TRBC1P01850 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRBC1P01850 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRBC1P01850 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRBC1P01850 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBC1P01850 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TRBC1P01850 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBC1P01850 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBC1P01850 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 AC012313.1-201ENST00000593393 3059 ntBASIC17.05■□□□□ 0.32
TRBC1P01850 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBC1P01850 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBC1P01850 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 AL021920.2-201ENST00000624828 1351 ntBASIC17.05■□□□□ 0.32
TRBC1P01850 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBC1P01850 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
TRBC1P01850 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBC1P01850 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.05■□□□□ 0.32
TRBC1P01850 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBC1P01850 AC107918.2-201ENST00000530817 355 ntBASIC17.05■□□□□ 0.32
TRBC1P01850 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.05■□□□□ 0.32
TRBC1P01850 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.05■□□□□ 0.32
TRBC1P01850 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBC1P01850 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBC1P01850 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRBC1P01850 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBC1P01850 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBC1P01850 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBC1P01850 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBC1P01850 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBC1P01850 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBC1P01850 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBC1P01850 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBC1P01850 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBC1P01850 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBC1P01850 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBC1P01850 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
TRBC1P01850 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms