Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AP002414.4-201ENST00000589764 1148 ntBASIC17.7■□□□□ 0.42
IFNB1P01574 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IFNB1P01574 AC116407.4-201ENST00000623319 1061 ntBASIC17.7■□□□□ 0.42
IFNB1P01574 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IFNB1P01574 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IFNB1P01574 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.7■□□□□ 0.42
IFNB1P01574 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IFNB1P01574 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
IFNB1P01574 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.7■□□□□ 0.42
IFNB1P01574 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
IFNB1P01574 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IFNB1P01574 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
IFNB1P01574 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
IFNB1P01574 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.7■□□□□ 0.42
IFNB1P01574 GPR89P-201ENST00000407924 1495 ntBASIC17.69■□□□□ 0.42
IFNB1P01574 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
IFNB1P01574 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
IFNB1P01574 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.69■□□□□ 0.42
IFNB1P01574 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.69■□□□□ 0.42
IFNB1P01574 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
IFNB1P01574 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
IFNB1P01574 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.69■□□□□ 0.42
IFNB1P01574 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
IFNB1P01574 FRMD8P1-201ENST00000440433 1524 ntBASIC17.69■□□□□ 0.42
IFNB1P01574 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
IFNB1P01574 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.69■□□□□ 0.42
IFNB1P01574 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.69■□□□□ 0.42
IFNB1P01574 DRAXINP1-201ENST00000437611 948 ntBASIC17.69■□□□□ 0.42
IFNB1P01574 AP002383.4-201ENST00000442518 975 ntBASIC17.69■□□□□ 0.42
IFNB1P01574 LINC00265-3P-201ENST00000447588 903 ntBASIC17.69■□□□□ 0.42
IFNB1P01574 KRT17P6-201ENST00000453795 1220 ntBASIC17.69■□□□□ 0.42
IFNB1P01574 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.69■□□□□ 0.42
IFNB1P01574 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.69■□□□□ 0.42
IFNB1P01574 TPSP2-201ENST00000561760 610 ntBASIC17.69■□□□□ 0.42
IFNB1P01574 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.69■□□□□ 0.42
IFNB1P01574 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
IFNB1P01574 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
IFNB1P01574 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
IFNB1P01574 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFNB1P01574 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.69■□□□□ 0.42
IFNB1P01574 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.68■□□□□ 0.42
IFNB1P01574 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
IFNB1P01574 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
IFNB1P01574 NSUN5P1-202ENST00000421140 1535 ntBASIC17.68■□□□□ 0.42
IFNB1P01574 NSUN5P2-203ENST00000457352 1529 ntBASIC17.68■□□□□ 0.42
IFNB1P01574 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.68■□□□□ 0.42
IFNB1P01574 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.68■□□□□ 0.42
IFNB1P01574 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
IFNB1P01574 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.68■□□□□ 0.42
IFNB1P01574 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.68■□□□□ 0.42
IFNB1P01574 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.68■□□□□ 0.42
IFNB1P01574 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
IFNB1P01574 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.68■□□□□ 0.42
IFNB1P01574 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 BNIP3P18-201ENST00000593976 575 ntBASIC17.68■□□□□ 0.42
IFNB1P01574 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.68■□□□□ 0.42
IFNB1P01574 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.68■□□□□ 0.42
IFNB1P01574 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.68■□□□□ 0.42
IFNB1P01574 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 INTS4P1-201ENST00000438455 1935 ntBASIC17.68■□□□□ 0.42
IFNB1P01574 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
IFNB1P01574 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.68■□□□□ 0.42
IFNB1P01574 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFNB1P01574 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IFNB1P01574 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFNB1P01574 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.67■□□□□ 0.42
IFNB1P01574 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.67■□□□□ 0.42
IFNB1P01574 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.67■□□□□ 0.42
IFNB1P01574 AL603756.1-201ENST00000606511 2163 ntBASIC17.67■□□□□ 0.42
IFNB1P01574 IER3-202ENST00000376377 1350 ntBASIC17.67■□□□□ 0.42
IFNB1P01574 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.67■□□□□ 0.42
IFNB1P01574 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.67■□□□□ 0.42
IFNB1P01574 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.67■□□□□ 0.42
IFNB1P01574 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IFNB1P01574 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms