Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 SLC25A1P3-201ENST00000395415 828 ntBASIC13.54□□□□□ -0.24
IFNA1P01562 KRASP1-201ENST00000407852 552 ntBASIC13.54□□□□□ -0.24
IFNA1P01562 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.54□□□□□ -0.24
IFNA1P01562 RPS2P4-201ENST00000476944 856 ntBASIC13.54□□□□□ -0.24
IFNA1P01562 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.54□□□□□ -0.24
IFNA1P01562 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.54□□□□□ -0.24
IFNA1P01562 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.54□□□□□ -0.24
IFNA1P01562 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
IFNA1P01562 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
IFNA1P01562 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.54□□□□□ -0.24
IFNA1P01562 HLA-A-202ENST00000376806 1854 ntBASIC13.54□□□□□ -0.24
IFNA1P01562 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.54□□□□□ -0.24
IFNA1P01562 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
IFNA1P01562 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.54□□□□□ -0.24
IFNA1P01562 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
IFNA1P01562 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.54□□□□□ -0.24
IFNA1P01562 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IFNA1P01562 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.53□□□□□ -0.24
IFNA1P01562 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
IFNA1P01562 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.53□□□□□ -0.24
IFNA1P01562 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.53□□□□□ -0.24
IFNA1P01562 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.53□□□□□ -0.24
IFNA1P01562 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.53□□□□□ -0.24
IFNA1P01562 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
IFNA1P01562 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.53□□□□□ -0.24
IFNA1P01562 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
IFNA1P01562 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.53□□□□□ -0.24
IFNA1P01562 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
IFNA1P01562 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
IFNA1P01562 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.53□□□□□ -0.24
IFNA1P01562 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.53□□□□□ -0.24
IFNA1P01562 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 CA15P1-201ENST00000481698 905 ntBASIC13.53□□□□□ -0.24
IFNA1P01562 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.53□□□□□ -0.24
IFNA1P01562 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.53□□□□□ -0.24
IFNA1P01562 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.53□□□□□ -0.24
IFNA1P01562 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.53□□□□□ -0.24
IFNA1P01562 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.53□□□□□ -0.24
IFNA1P01562 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.53□□□□□ -0.24
IFNA1P01562 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 MTDHP1-201ENST00000605323 784 ntBASIC13.53□□□□□ -0.24
IFNA1P01562 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.53□□□□□ -0.24
IFNA1P01562 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.53□□□□□ -0.24
IFNA1P01562 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 AC112497.1-201ENST00000624824 639 ntBASIC13.53□□□□□ -0.24
IFNA1P01562 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
IFNA1P01562 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.53□□□□□ -0.24
IFNA1P01562 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.53□□□□□ -0.24
IFNA1P01562 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.53□□□□□ -0.24
IFNA1P01562 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.53□□□□□ -0.24
IFNA1P01562 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.53□□□□□ -0.24
IFNA1P01562 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.53□□□□□ -0.24
IFNA1P01562 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IFNA1P01562 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.53□□□□□ -0.24
IFNA1P01562 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms