Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.31■□□□□ 0.52
CSPG5O95196 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 AC002056.1-201ENST00000395613 760 ntBASIC18.31■□□□□ 0.52
CSPG5O95196 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.31■□□□□ 0.52
CSPG5O95196 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.31■□□□□ 0.52
CSPG5O95196 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 AC002558.1-201ENST00000488906 803 ntBASIC18.31■□□□□ 0.52
CSPG5O95196 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.31■□□□□ 0.52
CSPG5O95196 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.31■□□□□ 0.52
CSPG5O95196 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CSPG5O95196 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.31■□□□□ 0.52
CSPG5O95196 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.31■□□□□ 0.52
CSPG5O95196 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.31■□□□□ 0.52
CSPG5O95196 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.31■□□□□ 0.52
CSPG5O95196 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CSPG5O95196 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CSPG5O95196 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CSPG5O95196 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CSPG5O95196 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CSPG5O95196 AC046185.3-201ENST00000623228 1824 ntBASIC18.3■□□□□ 0.52
CSPG5O95196 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CSPG5O95196 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CSPG5O95196 BICD1-207ENST00000551848 1962 ntBASIC18.3■□□□□ 0.52
CSPG5O95196 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CSPG5O95196 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CSPG5O95196 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CSPG5O95196 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.3■□□□□ 0.52
CSPG5O95196 FAM58DP-201ENST00000428076 619 ntBASIC18.3■□□□□ 0.52
CSPG5O95196 UGT1A2P-201ENST00000454886 866 ntBASIC18.3■□□□□ 0.52
CSPG5O95196 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CSPG5O95196 AC087163.2-201ENST00000457299 853 ntBASIC18.3■□□□□ 0.52
CSPG5O95196 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.3■□□□□ 0.52
CSPG5O95196 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.3■□□□□ 0.52
CSPG5O95196 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.3■□□□□ 0.52
CSPG5O95196 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.3■□□□□ 0.52
CSPG5O95196 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CSPG5O95196 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.3■□□□□ 0.52
CSPG5O95196 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CSPG5O95196 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 NOC2LP1-202ENST00000452600 2235 ntBASIC18.3■□□□□ 0.52
CSPG5O95196 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CSPG5O95196 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSPG5O95196 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.29■□□□□ 0.52
CSPG5O95196 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CSPG5O95196 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.29■□□□□ 0.52
CSPG5O95196 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.29■□□□□ 0.52
CSPG5O95196 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG5O95196 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG5O95196 AL354751.1-201ENST00000412768 1863 ntBASIC18.29■□□□□ 0.52
CSPG5O95196 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CSPG5O95196 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CSPG5O95196 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG5O95196 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CSPG5O95196 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG5O95196 MYCLP1-201ENST00000372451 1075 ntBASIC18.29■□□□□ 0.52
CSPG5O95196 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.29■□□□□ 0.52
CSPG5O95196 CNN2P2-201ENST00000443536 909 ntBASIC18.29■□□□□ 0.52
CSPG5O95196 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.29■□□□□ 0.52
CSPG5O95196 CNN2P3-201ENST00000450201 906 ntBASIC18.29■□□□□ 0.52
CSPG5O95196 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSPG5O95196 AC125807.1-201ENST00000483097 614 ntBASIC18.29■□□□□ 0.52
CSPG5O95196 AC079140.1-201ENST00000508039 487 ntBASIC18.29■□□□□ 0.52
CSPG5O95196 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.29■□□□□ 0.52
CSPG5O95196 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.29■□□□□ 0.52
CSPG5O95196 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.29■□□□□ 0.52
CSPG5O95196 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.29■□□□□ 0.52
CSPG5O95196 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.29■□□□□ 0.52
CSPG5O95196 AC190387.1-201ENST00000551683 408 ntBASIC18.29■□□□□ 0.52
CSPG5O95196 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.29■□□□□ 0.52
CSPG5O95196 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.29■□□□□ 0.52
CSPG5O95196 AL136317.3-201ENST00000618497 906 ntBASIC18.29■□□□□ 0.52
CSPG5O95196 AL390754.1-201ENST00000619088 582 ntBASIC18.29■□□□□ 0.52
CSPG5O95196 AJ011932.1-201ENST00000621707 465 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms