Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
PCDH7O60245 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH7O60245 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDH7O60245 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDH7O60245 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDH7O60245 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 TUBB8P12-201ENST00000308911 1335 ntBASIC16.3■□□□□ 0.2
PCDH7O60245 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PCDH7O60245 TUBB7P-202ENST00000428444 1305 ntBASIC16.3■□□□□ 0.2
PCDH7O60245 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH7O60245 TUBB8P7-204ENST00000567960 1332 ntBASIC16.3■□□□□ 0.2
PCDH7O60245 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH7O60245 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH7O60245 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDH7O60245 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDH7O60245 PRYP5-201ENST00000451909 266 ntBASIC16.3■□□□□ 0.2
PCDH7O60245 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 PRELID1P1-202ENST00000567272 903 ntBASIC16.3■□□□□ 0.2
PCDH7O60245 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
PCDH7O60245 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDH7O60245 AL022326.1-202ENST00000641533 845 ntBASIC16.3■□□□□ 0.2
PCDH7O60245 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDH7O60245 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDH7O60245 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH7O60245 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDH7O60245 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH7O60245 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH7O60245 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH7O60245 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDH7O60245 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PCDH7O60245 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDH7O60245 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PCDH7O60245 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH7O60245 AL356309.3-201ENST00000624132 1934 ntBASIC16.29■□□□□ 0.2
PCDH7O60245 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH7O60245 NCF1C-201ENST00000438382 1427 ntBASIC16.29■□□□□ 0.2
PCDH7O60245 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDH7O60245 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PCDH7O60245 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDH7O60245 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDH7O60245 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDH7O60245 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDH7O60245 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.29■□□□□ 0.2
PCDH7O60245 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH7O60245 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDH7O60245 NKAPP1-205ENST00000585790 367 ntBASIC16.29■□□□□ 0.2
PCDH7O60245 MTDHP3-201ENST00000594186 672 ntBASIC16.29■□□□□ 0.2
PCDH7O60245 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
PCDH7O60245 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.29■□□□□ 0.2
PCDH7O60245 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH7O60245 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 PCDHB17P-201ENST00000539533 2393 ntBASIC16.29■□□□□ 0.2
PCDH7O60245 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH7O60245 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH7O60245 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDH7O60245 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDH7O60245 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDH7O60245 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDH7O60245 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDH7O60245 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms