Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
DUX1O43812 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
DUX1O43812 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.28■□□□□ 0.2
DUX1O43812 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.28■□□□□ 0.2
DUX1O43812 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
DUX1O43812 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX1O43812 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
DUX1O43812 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX1O43812 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.27■□□□□ 0.2
DUX1O43812 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.27■□□□□ 0.2
DUX1O43812 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DUX1O43812 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.27■□□□□ 0.2
DUX1O43812 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
DUX1O43812 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.27■□□□□ 0.2
DUX1O43812 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
DUX1O43812 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DUX1O43812 AKAP8P1-201ENST00000434743 1349 ntBASIC16.27■□□□□ 0.2
DUX1O43812 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX1O43812 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
DUX1O43812 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
DUX1O43812 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX1O43812 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX1O43812 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
DUX1O43812 SLC25A1P3-201ENST00000395415 828 ntBASIC16.27■□□□□ 0.2
DUX1O43812 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.27■□□□□ 0.2
DUX1O43812 TFAMP1-201ENST00000412727 736 ntBASIC16.27■□□□□ 0.2
DUX1O43812 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX1O43812 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX1O43812 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DUX1O43812 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.27■□□□□ 0.2
DUX1O43812 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
DUX1O43812 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX1O43812 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.27■□□□□ 0.2
DUX1O43812 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
DUX1O43812 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.27■□□□□ 0.2
DUX1O43812 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.27■□□□□ 0.2
DUX1O43812 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.27■□□□□ 0.2
DUX1O43812 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.27■□□□□ 0.2
DUX1O43812 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
DUX1O43812 AC087641.1-201ENST00000557561 1021 ntBASIC16.27■□□□□ 0.2
DUX1O43812 MIR3197-201ENST00000582241 73 ntBASIC16.27■□□□□ 0.2
DUX1O43812 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.27■□□□□ 0.2
DUX1O43812 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
DUX1O43812 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.27■□□□□ 0.2
DUX1O43812 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.27■□□□□ 0.2
DUX1O43812 AL009183.1-201ENST00000603760 355 ntBASIC16.27■□□□□ 0.2
DUX1O43812 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.27■□□□□ 0.2
DUX1O43812 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
DUX1O43812 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.27■□□□□ 0.19
DUX1O43812 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DUX1O43812 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.26■□□□□ 0.19
DUX1O43812 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
DUX1O43812 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.26■□□□□ 0.19
DUX1O43812 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
DUX1O43812 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.26■□□□□ 0.19
DUX1O43812 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
DUX1O43812 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.26■□□□□ 0.19
DUX1O43812 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
DUX1O43812 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.26■□□□□ 0.19
DUX1O43812 AC005237.2-201ENST00000434368 219 ntBASIC16.26■□□□□ 0.19
DUX1O43812 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.26■□□□□ 0.19
DUX1O43812 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.26■□□□□ 0.19
DUX1O43812 AC109635.5-201ENST00000533593 962 ntBASIC16.26■□□□□ 0.19
DUX1O43812 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
DUX1O43812 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.26■□□□□ 0.19
DUX1O43812 AC025678.2-201ENST00000562061 970 ntBASIC16.26■□□□□ 0.19
DUX1O43812 AL135744.1-201ENST00000565098 629 ntBASIC16.26■□□□□ 0.19
DUX1O43812 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.26■□□□□ 0.19
DUX1O43812 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.26■□□□□ 0.19
DUX1O43812 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
DUX1O43812 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.26■□□□□ 0.19
DUX1O43812 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.26■□□□□ 0.19
DUX1O43812 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.26■□□□□ 0.19
DUX1O43812 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
DUX1O43812 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX1O43812 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.26■□□□□ 0.19
DUX1O43812 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms