Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.25■□□□□ 0.35
KDELR3O43731 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.25■□□□□ 0.35
KDELR3O43731 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.25■□□□□ 0.35
KDELR3O43731 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.25■□□□□ 0.35
KDELR3O43731 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
KDELR3O43731 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KDELR3O43731 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KDELR3O43731 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KDELR3O43731 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
KDELR3O43731 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.25■□□□□ 0.35
KDELR3O43731 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
KDELR3O43731 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
KDELR3O43731 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.25■□□□□ 0.35
KDELR3O43731 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.25■□□□□ 0.35
KDELR3O43731 AC040169.1-201ENST00000565382 521 ntBASIC17.25■□□□□ 0.35
KDELR3O43731 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.25■□□□□ 0.35
KDELR3O43731 AC091167.2-201ENST00000579581 588 ntBASIC17.25■□□□□ 0.35
KDELR3O43731 MPDU1-223ENST00000582151 728 ntBASIC17.25■□□□□ 0.35
KDELR3O43731 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.25■□□□□ 0.35
KDELR3O43731 AC023141.13-201ENST00000604991 943 ntBASIC17.25■□□□□ 0.35
KDELR3O43731 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.25■□□□□ 0.35
KDELR3O43731 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KDELR3O43731 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KDELR3O43731 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KDELR3O43731 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.25■□□□□ 0.35
KDELR3O43731 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KDELR3O43731 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KDELR3O43731 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KDELR3O43731 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KDELR3O43731 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KDELR3O43731 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.24■□□□□ 0.35
KDELR3O43731 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KDELR3O43731 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.24■□□□□ 0.35
KDELR3O43731 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
KDELR3O43731 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.24■□□□□ 0.35
KDELR3O43731 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.24■□□□□ 0.35
KDELR3O43731 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.24■□□□□ 0.35
KDELR3O43731 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KDELR3O43731 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KDELR3O43731 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KDELR3O43731 BCAR1-209ENST00000546196 1340 ntBASIC17.23■□□□□ 0.35
KDELR3O43731 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KDELR3O43731 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.23■□□□□ 0.35
KDELR3O43731 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KDELR3O43731 PCDHB17P-201ENST00000539533 2393 ntBASIC17.23■□□□□ 0.35
KDELR3O43731 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
KDELR3O43731 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
KDELR3O43731 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KDELR3O43731 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KDELR3O43731 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
KDELR3O43731 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KDELR3O43731 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
KDELR3O43731 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KDELR3O43731 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KDELR3O43731 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
KDELR3O43731 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KDELR3O43731 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
KDELR3O43731 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.23■□□□□ 0.35
KDELR3O43731 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
KDELR3O43731 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.23■□□□□ 0.35
KDELR3O43731 MIR4515-201ENST00000584082 81 ntBASIC17.23■□□□□ 0.35
KDELR3O43731 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.23■□□□□ 0.35
KDELR3O43731 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KDELR3O43731 AC092865.6-201ENST00000642101 219 ntBASIC17.23■□□□□ 0.35
KDELR3O43731 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
KDELR3O43731 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KDELR3O43731 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.23■□□□□ 0.35
KDELR3O43731 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
KDELR3O43731 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KDELR3O43731 SLC22A20-204ENST00000530038 1673 ntBASIC17.23■□□□□ 0.35
KDELR3O43731 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KDELR3O43731 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
KDELR3O43731 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.22■□□□□ 0.35
KDELR3O43731 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 AC025580.3-201ENST00000617932 1424 ntBASIC17.22■□□□□ 0.35
KDELR3O43731 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms