Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.35■□□□□ 0.37
RIPK2O43353 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
RIPK2O43353 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RIPK2O43353 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 FAM220CP-201ENST00000395253 831 ntBASIC17.35■□□□□ 0.37
RIPK2O43353 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.35■□□□□ 0.37
RIPK2O43353 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.35■□□□□ 0.37
RIPK2O43353 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.35■□□□□ 0.37
RIPK2O43353 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.35■□□□□ 0.37
RIPK2O43353 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.35■□□□□ 0.37
RIPK2O43353 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.35■□□□□ 0.37
RIPK2O43353 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.35■□□□□ 0.37
RIPK2O43353 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.35■□□□□ 0.37
RIPK2O43353 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RIPK2O43353 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
RIPK2O43353 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RIPK2O43353 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RIPK2O43353 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RIPK2O43353 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RIPK2O43353 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RIPK2O43353 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RIPK2O43353 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.34■□□□□ 0.37
RIPK2O43353 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.34■□□□□ 0.37
RIPK2O43353 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.34■□□□□ 0.37
RIPK2O43353 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RIPK2O43353 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.34■□□□□ 0.37
RIPK2O43353 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.34■□□□□ 0.37
RIPK2O43353 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
RIPK2O43353 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.34■□□□□ 0.37
RIPK2O43353 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.34■□□□□ 0.37
RIPK2O43353 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 DUX4L17-201ENST00000557360 1267 ntBASIC17.34■□□□□ 0.37
RIPK2O43353 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 AC006538.1-201ENST00000567905 1585 ntBASIC17.34■□□□□ 0.37
RIPK2O43353 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
RIPK2O43353 AC005336.2-201ENST00000593183 939 ntBASIC17.34■□□□□ 0.37
RIPK2O43353 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.34■□□□□ 0.37
RIPK2O43353 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.34■□□□□ 0.37
RIPK2O43353 AL353801.3-201ENST00000609898 542 ntBASIC17.34■□□□□ 0.37
RIPK2O43353 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RIPK2O43353 AC073912.3-201ENST00000624414 853 ntBASIC17.34■□□□□ 0.37
RIPK2O43353 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.34■□□□□ 0.37
RIPK2O43353 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.34■□□□□ 0.37
RIPK2O43353 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RIPK2O43353 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.34■□□□□ 0.37
RIPK2O43353 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.34■□□□□ 0.37
RIPK2O43353 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.34■□□□□ 0.37
RIPK2O43353 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RIPK2O43353 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RIPK2O43353 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RIPK2O43353 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RIPK2O43353 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RIPK2O43353 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RIPK2O43353 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RIPK2O43353 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.33■□□□□ 0.37
RIPK2O43353 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RIPK2O43353 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.33■□□□□ 0.37
RIPK2O43353 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.33■□□□□ 0.37
RIPK2O43353 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RIPK2O43353 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RIPK2O43353 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RIPK2O43353 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RIPK2O43353 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RIPK2O43353 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
RIPK2O43353 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
RIPK2O43353 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RIPK2O43353 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RIPK2O43353 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.33■□□□□ 0.36
RIPK2O43353 KRT18P38-201ENST00000449496 1282 ntBASIC17.33■□□□□ 0.36
RIPK2O43353 HLA-J-202ENST00000469281 1241 ntBASIC17.33■□□□□ 0.36
RIPK2O43353 YBX1P2-201ENST00000489612 999 ntBASIC17.33■□□□□ 0.36
RIPK2O43353 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
RIPK2O43353 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RIPK2O43353 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RIPK2O43353 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.33■□□□□ 0.36
RIPK2O43353 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.33■□□□□ 0.36
RIPK2O43353 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms