Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC27.08■■□□□ 1.93
CHD1O14646 MNT-208ENST00000575394 606 ntTSL 4 BASIC27.08■■□□□ 1.93
CHD1O14646 AL391069.4-201ENST00000609583 481 ntBASIC27.08■■□□□ 1.93
CHD1O14646 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CHD1O14646 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHD1O14646 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CHD1O14646 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC27.08■■□□□ 1.93
CHD1O14646 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHD1O14646 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHD1O14646 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
CHD1O14646 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
CHD1O14646 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
CHD1O14646 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
CHD1O14646 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CHD1O14646 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CHD1O14646 MEP1AP4-201ENST00000423244 1087 ntBASIC27.07■■□□□ 1.92
CHD1O14646 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
CHD1O14646 PIGL-212ENST00000581006 554 ntTSL 4 BASIC27.07■■□□□ 1.92
CHD1O14646 AL033527.5-202ENST00000641632 1098 ntBASIC27.07■■□□□ 1.92
CHD1O14646 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CHD1O14646 STK4-201ENST00000372801 2038 ntTSL 2 BASIC27.07■■□□□ 1.92
CHD1O14646 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC27.07■■□□□ 1.92
CHD1O14646 EGFEM1P-202ENST00000431685 1563 ntBASIC27.07■■□□□ 1.92
CHD1O14646 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC27.07■■□□□ 1.92
CHD1O14646 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
CHD1O14646 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC27.07■■□□□ 1.92
CHD1O14646 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CHD1O14646 MPV17-206ENST00000402722 827 ntTSL 3 BASIC27.07■■□□□ 1.92
CHD1O14646 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC27.07■■□□□ 1.92
CHD1O14646 QPRT-203ENST00000562473 579 ntTSL 3 BASIC27.07■■□□□ 1.92
CHD1O14646 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC27.07■■□□□ 1.92
CHD1O14646 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CHD1O14646 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC27.07■■□□□ 1.92
CHD1O14646 LINC01451-201ENST00000623792 534 ntBASIC27.07■■□□□ 1.92
CHD1O14646 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CHD1O14646 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC27.07■■□□□ 1.92
CHD1O14646 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
CHD1O14646 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC27.06■■□□□ 1.92
CHD1O14646 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CHD1O14646 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CHD1O14646 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CHD1O14646 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC27.06■■□□□ 1.92
CHD1O14646 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC27.06■■□□□ 1.92
CHD1O14646 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC27.06■■□□□ 1.92
CHD1O14646 FADS2-205ENST00000517839 469 ntTSL 3 BASIC27.06■■□□□ 1.92
CHD1O14646 NAA38-207ENST00000576861 556 ntTSL 3 BASIC27.06■■□□□ 1.92
CHD1O14646 MIR6727-201ENST00000620702 65 ntBASIC27.06■■□□□ 1.92
CHD1O14646 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC27.06■■□□□ 1.92
CHD1O14646 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC27.06■■□□□ 1.92
CHD1O14646 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
CHD1O14646 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CHD1O14646 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC27.05■■□□□ 1.92
CHD1O14646 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
CHD1O14646 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CHD1O14646 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC27.05■■□□□ 1.92
CHD1O14646 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC27.05■■□□□ 1.92
CHD1O14646 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC27.05■■□□□ 1.92
CHD1O14646 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CHD1O14646 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC27.05■■□□□ 1.92
CHD1O14646 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC27.05■■□□□ 1.92
CHD1O14646 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC27.05■■□□□ 1.92
CHD1O14646 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC27.05■■□□□ 1.92
CHD1O14646 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC27.05■■□□□ 1.92
CHD1O14646 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CHD1O14646 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC27.05■■□□□ 1.92
CHD1O14646 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC27.05■■□□□ 1.92
CHD1O14646 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHD1O14646 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHD1O14646 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC27.05■■□□□ 1.92
CHD1O14646 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHD1O14646 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CHD1O14646 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHD1O14646 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC27.05■■□□□ 1.92
CHD1O14646 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC27.05■■□□□ 1.92
CHD1O14646 CDC14C-201ENST00000428251 1719 ntBASIC27.05■■□□□ 1.92
CHD1O14646 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
CHD1O14646 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC27.05■■□□□ 1.92
CHD1O14646 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC27.05■■□□□ 1.92
CHD1O14646 HLA-DQB1-201ENST00000374943 1656 ntBASIC27.05■■□□□ 1.92
CHD1O14646 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC27.04■■□□□ 1.92
CHD1O14646 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1O14646 AC006033.1-201ENST00000440505 426 ntBASIC27.04■■□□□ 1.92
CHD1O14646 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC27.04■■□□□ 1.92
CHD1O14646 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC27.04■■□□□ 1.92
CHD1O14646 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
CHD1O14646 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1O14646 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1O14646 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC27.04■■□□□ 1.92
CHD1O14646 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1O14646 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC27.04■■□□□ 1.92
CHD1O14646 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1O14646 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC27.04■■□□□ 1.92
CHD1O14646 RAD18-204ENST00000418463 563 ntTSL 4 BASIC27.04■■□□□ 1.92
CHD1O14646 RAD18-205ENST00000421052 582 ntTSL 3 BASIC27.04■■□□□ 1.92
CHD1O14646 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
CHD1O14646 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1O14646 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC27.04■■□□□ 1.92
CHD1O14646 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC27.04■■□□□ 1.92
CHD1O14646 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC27.04■■□□□ 1.92
CHD1O14646 SIGLEC29P-201ENST00000599873 1114 ntBASIC27.04■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms