Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHL1O00533 PC-204ENST00000524491 1714 ntTSL 2 BASIC21.77■■□□□ 1.08
CHL1O00533 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHL1O00533 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHL1O00533 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.77■■□□□ 1.08
CHL1O00533 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CHL1O00533 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CHL1O00533 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CHL1O00533 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
CHL1O00533 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CHL1O00533 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHL1O00533 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHL1O00533 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
CHL1O00533 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHL1O00533 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
CHL1O00533 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHL1O00533 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
CHL1O00533 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHL1O00533 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHL1O00533 RPS8P6-201ENST00000426177 609 ntBASIC21.76■■□□□ 1.07
CHL1O00533 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.76■■□□□ 1.07
CHL1O00533 AC092183.1-201ENST00000469884 875 ntBASIC21.76■■□□□ 1.07
CHL1O00533 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CHL1O00533 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHL1O00533 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.76■■□□□ 1.07
CHL1O00533 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.76■■□□□ 1.07
CHL1O00533 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.76■■□□□ 1.07
CHL1O00533 AL031055.1-201ENST00000606362 631 ntBASIC21.76■■□□□ 1.07
CHL1O00533 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.76■■□□□ 1.07
CHL1O00533 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHL1O00533 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHL1O00533 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.76■■□□□ 1.07
CHL1O00533 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.76■■□□□ 1.07
CHL1O00533 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHL1O00533 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
CHL1O00533 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHL1O00533 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 AL671710.1-201ENST00000610245 2349 ntBASIC21.75■■□□□ 1.07
CHL1O00533 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
CHL1O00533 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC21.75■■□□□ 1.07
CHL1O00533 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.75■■□□□ 1.07
CHL1O00533 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.75■■□□□ 1.07
CHL1O00533 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHL1O00533 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.75■■□□□ 1.07
CHL1O00533 PMS2P4-201ENST00000412466 1052 ntBASIC21.75■■□□□ 1.07
CHL1O00533 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.75■■□□□ 1.07
CHL1O00533 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.75■■□□□ 1.07
CHL1O00533 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.75■■□□□ 1.07
CHL1O00533 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.75■■□□□ 1.07
CHL1O00533 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CHL1O00533 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.75■■□□□ 1.07
CHL1O00533 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
CHL1O00533 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHL1O00533 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.75■■□□□ 1.07
CHL1O00533 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHL1O00533 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CHL1O00533 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHL1O00533 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHL1O00533 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHL1O00533 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHL1O00533 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHL1O00533 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CHL1O00533 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CHL1O00533 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHL1O00533 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHL1O00533 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHL1O00533 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.74■■□□□ 1.07
CHL1O00533 AL671277.1-201ENST00000429656 993 ntBASIC21.74■■□□□ 1.07
CHL1O00533 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.74■■□□□ 1.07
CHL1O00533 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21.74■■□□□ 1.07
CHL1O00533 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.74■■□□□ 1.07
CHL1O00533 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.74■■□□□ 1.07
CHL1O00533 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.74■■□□□ 1.07
CHL1O00533 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.74■■□□□ 1.07
CHL1O00533 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHL1O00533 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.74■■□□□ 1.07
CHL1O00533 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.74■■□□□ 1.07
CHL1O00533 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.74■■□□□ 1.07
CHL1O00533 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHL1O00533 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHL1O00533 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.74■■□□□ 1.07
CHL1O00533 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHL1O00533 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHL1O00533 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHL1O00533 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHL1O00533 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms