Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YJEFN3A6XGL0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
YJEFN3A6XGL0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
YJEFN3A6XGL0 PCDHB17P-201ENST00000539533 2393 ntBASIC17.74■□□□□ 0.43
YJEFN3A6XGL0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YJEFN3A6XGL0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
YJEFN3A6XGL0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
YJEFN3A6XGL0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
YJEFN3A6XGL0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 SLC22A20-204ENST00000530038 1673 ntBASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 AL513480.1-201ENST00000451731 511 ntBASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 AC040169.1-201ENST00000565382 521 ntBASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 AL121761.2-201ENST00000598007 1648 ntBASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 AC025580.3-201ENST00000617932 1424 ntBASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 TUBB8P12-201ENST00000308911 1335 ntBASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 TUBB7P-202ENST00000428444 1305 ntBASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 BCAR1-209ENST00000546196 1340 ntBASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 TUBB8P7-204ENST00000567960 1332 ntBASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
YJEFN3A6XGL0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 AC022211.2-201ENST00000585075 2527 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms