Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 DBET-201ENST00000630918 3363 ntBASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 CYP2D8P-201ENST00000433633 1490 ntBASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 Z99916.2-201ENST00000604037 246 ntBASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 AC092666.2-201ENST00000613287 246 ntBASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.99■□□□□ 0.15
TCRBV3S1A0A5B6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 AC103564.2-201ENST00000432853 1299 ntBASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 AC010491.1-201ENST00000563101 2797 ntBASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 MIR4785-201ENST00000585005 73 ntBASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 AC009336.1-201ENST00000608941 1553 ntBASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 AC010947.1-201ENST00000623454 693 ntBASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 AC022532.1-201ENST00000624563 1728 ntBASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV3S1A0A5B6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
TCRBV3S1A0A5B6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms