Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
R3HCC1Q9Y3T6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 AC005332.3-201ENST00000589904 676 ntBASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 GPR32P1-201ENST00000601788 811 ntBASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 AC116407.4-201ENST00000623319 1061 ntBASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 AC024909.3-201ENST00000611513 2257 ntBASIC19.63■□□□□ 0.73
R3HCC1Q9Y3T6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 SPDYE13P-201ENST00000445314 798 ntBASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 AL121672.3-201ENST00000608644 468 ntBASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 AL024508.2-201ENST00000607749 1894 ntBASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 Z83836.1-201ENST00000624605 1642 ntBASIC19.62■□□□□ 0.73
R3HCC1Q9Y3T6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 AL662844.4-201ENST00000606367 2838 ntBASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 TSPY22P-201ENST00000427496 604 ntBASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
R3HCC1Q9Y3T6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms