Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 AL162274.1-201ENST00000617191 1098 ntBASIC21.48■■□□□ 1.03
CCNL1Q9UK58 AP000974.1-201ENST00000623909 2387 ntBASIC21.48■■□□□ 1.03
CCNL1Q9UK58 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 LINC00896-202ENST00000609602 2128 ntBASIC21.47■■□□□ 1.03
CCNL1Q9UK58 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 MXI1-205ENST00000393134 889 ntTSL 2 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 AC135586.1-201ENST00000539323 574 ntBASIC21.47■■□□□ 1.03
CCNL1Q9UK58 AC104794.3-201ENST00000566840 1248 ntBASIC21.47■■□□□ 1.03
CCNL1Q9UK58 LITAF-210ENST00000571976 548 ntTSL 2 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 LINC00895-201ENST00000629028 1637 ntBASIC21.47■■□□□ 1.03
CCNL1Q9UK58 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.47■■□□□ 1.03
CCNL1Q9UK58 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.46■■□□□ 1.03
CCNL1Q9UK58 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 DFFBP1-201ENST00000433250 979 ntBASIC21.46■■□□□ 1.03
CCNL1Q9UK58 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 MIR6805-201ENST00000615055 62 ntBASIC21.46■■□□□ 1.03
CCNL1Q9UK58 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNL1Q9UK58 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CCNL1Q9UK58 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CCNL1Q9UK58 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 PRYP6-201ENST00000514804 343 ntBASIC21.45■■□□□ 1.02
CCNL1Q9UK58 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 CYP2A7P1-201ENST00000595391 815 ntBASIC21.45■■□□□ 1.02
CCNL1Q9UK58 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 RN7SL828P-201ENST00000607615 303 ntBASIC21.45■■□□□ 1.02
CCNL1Q9UK58 Six3os1_5.1-201ENST00000611000 271 ntBASIC21.45■■□□□ 1.02
CCNL1Q9UK58 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CCNL1Q9UK58 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 AC112492.5-201ENST00000421897 457 ntBASIC21.44■■□□□ 1.02
CCNL1Q9UK58 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms