Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 AC068137.2-201ENST00000605408 478 ntBASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE7Q9UBL6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 LINC00896-202ENST00000609602 2128 ntBASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.52■□□□□ 0.23
CPNE7Q9UBL6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 FAM58CP-201ENST00000435741 640 ntBASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 AP001160.2-201ENST00000596071 487 ntBASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 ELL2P1-201ENST00000413990 1906 ntBASIC16.51■□□□□ 0.23
CPNE7Q9UBL6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 PCDHB18P-201ENST00000524813 2368 ntBASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms