Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
THUMPD1Q9NXG2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 AC008741.2-201ENST00000612792 3115 ntBASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 AC132938.5-201ENST00000624980 1813 ntBASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 TSSC2-201ENST00000450217 709 ntBASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 MINOS1P3-201ENST00000457048 203 ntBASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 KRT18P1-202ENST00000452408 1331 ntBASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
THUMPD1Q9NXG2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 LINC02199-201ENST00000506655 2702 ntBASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 FAM86EP-206ENST00000510506 987 ntBASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 AL049597.2-201ENST00000565575 961 ntBASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 AC116407.4-201ENST00000623319 1061 ntBASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 TUBB8P12-201ENST00000308911 1335 ntBASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 TUBB7P-202ENST00000428444 1305 ntBASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 TUBB8P7-204ENST00000567960 1332 ntBASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 AL162727.3-201ENST00000635661 2787 ntBASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.09■□□□□ 0.17
THUMPD1Q9NXG2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
THUMPD1Q9NXG2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
THUMPD1Q9NXG2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
THUMPD1Q9NXG2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms