Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 PMPCAP1-201ENST00000508114 1576 ntBASIC16.85■□□□□ 0.29
MKS1Q9NXB0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 AK4P3-201ENST00000418260 669 ntBASIC16.85■□□□□ 0.29
MKS1Q9NXB0 IGHV3-41-201ENST00000613121 348 ntBASIC16.85■□□□□ 0.29
MKS1Q9NXB0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.85■□□□□ 0.29
MKS1Q9NXB0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 KRT8P49-201ENST00000604166 1432 ntBASIC16.85■□□□□ 0.29
MKS1Q9NXB0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 AC008741.2-201ENST00000612792 3115 ntBASIC16.85■□□□□ 0.29
MKS1Q9NXB0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MKS1Q9NXB0 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.85■□□□□ 0.29
MKS1Q9NXB0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 AC005521.1-201ENST00000393351 872 ntBASIC16.84■□□□□ 0.29
MKS1Q9NXB0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MKS1Q9NXB0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MKS1Q9NXB0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MKS1Q9NXB0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
MKS1Q9NXB0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MKS1Q9NXB0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
MKS1Q9NXB0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 SIGLEC30P-201ENST00000455569 941 ntBASIC16.83■□□□□ 0.28
MKS1Q9NXB0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 KRT8P26-201ENST00000534154 1276 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms