Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 AC140878.1-201ENST00000565277 250 ntBASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 AL008721.1-201ENST00000609964 604 ntBASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PDLIM7Q9NR12 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 RBPMS2P1-201ENST00000437762 623 ntBASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 AC087163.2-201ENST00000457299 853 ntBASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 AL135744.1-201ENST00000565098 629 ntBASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDLIM7Q9NR12 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 PCDHB18P-201ENST00000524813 2368 ntBASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 IGHV3-42-201ENST00000520410 361 ntBASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
PDLIM7Q9NR12 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 CRB3P1-201ENST00000449338 276 ntBASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms