Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC52A3Q9NQ40 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 AC016734.2-201ENST00000624325 1377 ntBASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 RCN1P1-201ENST00000400413 996 ntBASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 SPDYE21P-201ENST00000413323 827 ntBASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 TMPOP1-202ENST00000424642 1267 ntBASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 NTF6B-201ENST00000591913 560 ntBASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC52A3Q9NQ40 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.18
SLC52A3Q9NQ40 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SLC52A3Q9NQ40 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SLC52A3Q9NQ40 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SLC52A3Q9NQ40 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 KRT8P49-201ENST00000604166 1432 ntBASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 SNX33P1-201ENST00000592116 1762 ntBASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 SIGLEC30P-201ENST00000455569 941 ntBASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 BNIP3P18-201ENST00000593976 575 ntBASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 AC006277.1-201ENST00000624348 1610 ntBASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC52A3Q9NQ40 AC233702.3-201ENST00000578656 1387 ntBASIC16.13■□□□□ 0.17
SLC52A3Q9NQ40 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC52A3Q9NQ40 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC52A3Q9NQ40 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC52A3Q9NQ40 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC52A3Q9NQ40 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC52A3Q9NQ40 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms