Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 KLF4P1-201ENST00000412782 1185 ntBASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 GPR89P-201ENST00000407924 1495 ntBASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
POLR2J3Q9H1A7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 NFIC-211ENST00000641145 8399 ntBASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 TMPOP1-202ENST00000424642 1267 ntBASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 NTF6B-201ENST00000591913 560 ntBASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 AC092171.3-201ENST00000610122 2651 ntBASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
POLR2J3Q9H1A7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 AL031133.1-201ENST00000406807 723 ntBASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 Z69720.1-201ENST00000601483 472 ntBASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 AC008894.3-201ENST00000624324 3103 ntBASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 AC046158.3-201ENST00000624947 2558 ntBASIC15.81■□□□□ 0.12
POLR2J3Q9H1A7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 AC132938.5-201ENST00000624980 1813 ntBASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms